Job Description P75952 Confidence 99.78% Date Thu Jan 5 12:16:21 GMT 2012 Rank 93 Aligned Residues 178 % Identity 14% Template c3crjC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator; PDBTitle: crystal structure of a tetr transcription regulator from haloarcula2 marismortui atcc 43049 Resolution 2.60 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L	A	D
Query Conservation
Alig confidence												.	.	.	.	.													.	.																																					.	.	.
Template Conservation												.	.	.	.	.													.	.																																					.	.	.
Template Sequence		Q	T	E	E	I	X	Q	A	T	Y	.	.	.	.	.	R	A	L	R	D	L	T	I	Q	R	I	A	.	.	D	E	Y	S	T	A	A	V	H	Y	Y	Y	D	T	K	D	D	L	L	A	A	F	L	D	Y	L	L	E	R	F	V	D	S	I	H	D	.	.	.	V	E	T	T	D	P	E	A	R	L	N	L
Template Known Secondary structure			G	G	G	T	T	T	S	T	T	.	.	.	.	.	G	G	G					S					.	.	T	T			T	T	T	S		T	T	S	S																						T	T	.	.	.					S
Template Predicted Secondary structure												.	.	.	.	.													.	.																																					.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	E	F	L	N	C	I	I	Q
Query Conservation
Alig confidence													.	.																																																			.
Template Conservation													.	.																																																			.
Template Sequence		L	L	D	E	L	L	V	K	P	Q	E	.	.	N	P	D	L	S	V	A	L	L	E	X	R	S	Q	A	P	Y	K	E	A	F	S	D	R	F	R	Q	N	D	E	Y	V	R	Y	X	L	K	A	V	I	N	H	G	I	D	E	G	V	F	T	.	D	V	D	A	E	H	V	T	R	S	L	L	T	I	I	D
Template Known Secondary structure								T	G	G	G	S	.	.															G	G	G																														T	S	S		.
Template Predicted Secondary structure													.	.																																																			.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E	L	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	R	T	R	A	V	X	L	D	D	T	E	E	L	E	T	A	R	Q	T	A	S	E	Y	A	D	A	X	L	Q
Template Known Secondary structure										T	T		T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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