Job Description P75952 Confidence 99.93% Date Thu Jan 5 12:16:21 GMT 2012 Rank 3 Aligned Residues 194 % Identity 13% Template c2pbxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hemagglutinin/protease regulatory protein; PDBTitle: vibrio cholerae hapr Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	V	K	K	S	R	G	R	P	K	V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	K	R	P	R	T	R	L	S	P	Q	K	R	K	L	Q	L	M	E	I	A	L	E	V	F	A	K	R	G	I	G	R	G	G	H	A	D	I	A	E	I	A	Q	V	S	V	A	T	V	F	N	Y	F	P	T	R	E	D	L	V	D	D	V	L	N	F	V	V	R	Q	Y	S	N	F	L	T	D	H	I
Template Known Secondary structure																																T	T	S											T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	E	E	K	S	V	E	S	A	L	A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D
Query Conservation
Alig confidence		.																										.	.	.	.
Template Conservation		.																										.	.	.	.
Template Sequence		.	D	L	D	L	D	V	K	T	N	L	Q	T	L	C	K	E	M	V	K	L	A	M	T	D	C	.	.	.	.	H	W	L	K	V	W	F	E	W	S	A	S	T	R	D	E	V	W	P	L	F	V	S	T	N	R	T	N	Q	L	L	I	R	N	M	F	M	K	A	M	E	R	G	E	L	C	E	K	H	D
Template Known Secondary structure		.		T	T	S																		T	T	T		.	.	.	.											T				T	T	T								T																	T	T		S		T	T	S
Template Predicted Secondary structure		.																										.	.	.	.
Template SS confidence
			85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	H	L	A	E	F	L	N	C	I	I	Q	G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	N	M	A	S	L	F	H	G	I	F	Y	S	I	F	L	Q	V	N	R	L	G	E	Q	E	A	V	Y	K	L	A	D	S	Y	L	N	M	L
Template Known Secondary structure																							T																T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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