Job Description P75952 Confidence 99.72% Date Thu Jan 5 12:16:21 GMT 2012 Rank 112 Aligned Residues 176 % Identity 10% Template c2iu5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type dhaklm operon transcriptional activator dhas; PDBTitle: dihydroxyacetone kinase operon activator dhas Resolution 1.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	K	S	R	G	R	P	K	V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C
Query Conservation
Alig confidence						.	.	.	.	.																																																																							.
Template Conservation						.	.	.	.	.																																																																							.
Template Sequence		M	E	K	S	.	.	.	.	.	I	I	T	Q	K	I	I	A	K	A	F	K	D	L	M	Q	S	N	A	Y	H	Q	I	S	V	S	D	I	M	Q	T	A	K	I	R	R	Q	T	F	Y	N	Y	F	Q	N	Q	E	E	L	L	S	W	I	F	E	N	D	F	A	E	L	I	N	D	N	S	D	Y	Y	G	.
Template Known Secondary structure				T	T	.	.	.	.	.	S																	S		G	G	G											T	S		G	G	G	G	G	G	T		S	S																		T	S	S			S	S		.
Template Predicted Secondary structure						.	.	.	.	.																																																																							.
Template SS confidence
		1	.	.	.						.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	K	S	V	E	S	A	L	A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.																										.	.	.
Template Conservation		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.																										.	.	.
Template Sequence		.	.	.	.	.	.	.	.	W	Q	N	E	L	L	L	L	L	R	Y	L	D	E	N	Q	I	F	Y	Q	K	I	F	V	I	.	.	.	.	.	.	.	D	K	N	F	E	H	F	F	L	I	Q	W	E	N	L	L	D	K	V	I	F	D	Q	E	K	.	.	.	K	S	D	Y	H	W	S	D	L	E	K	S
Template Known Secondary structure		.	.	.	.	.	.	.	.															T											.	.	.	.	.	.	.		T	T																							.	.	.		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.																										.	.	.
Template SS confidence
										75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	A	E	F	L	N	C	I	I	Q	G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E	L	V	K
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		F	I	C	R	Y	N	A	A	A	I	C	A	I	T	R	E	S	I	I	R	G	N	.	.	S	L	E	K	L	Y	S	Q	I	V	N	L	L	L	A	Q	I	K
Template Known Secondary structure																						T		.	.		S	G	G	G
Template Predicted Secondary structure																								.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions