Job Description P75952 Confidence 99.73% Date Thu Jan 5 12:16:21 GMT 2012 Rank 110 Aligned Residues 183 % Identity 13% Template c2hxoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: structure of the transcriptional regulator sco7222, a tetr from2 streptomyces coelicolor Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L	A
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		L	S	R	E	R	I	V	G	A	A	V	E	L	L	D	T	V	G	E	R	G	L	T	F	R	A	L	A	E	R	L	A	T	G	P	G	A	I	Y	W	H	I	T	G	K	A	E	L	L	G	A	A	T	D	A	V	V	T	A	A	V	T	.	.	.	.	.	.	.	A	A	A	D	S	P	Q	D	A	V	R
Template Known Secondary structure																		T	T	T	T	T											T	S		G	G	G	G	G	G	T																						.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		A	V	A	L	G	L	W	D	A	T	E	A	.	.	H	P	W	L	A	T	Q	L	A	T	Q	L	S	R	T	P	W	G	T	V	A	P	R	I	F	E	S	L	G	R	Q	V	Q	A	X	G	V	P	E	A	H	W	F	T	A	S	S	A	L	X	H	Y	I	L	G	A	A	G	Q	N	A	A	N	S	A	D
Template Known Secondary structure														.	.		T														T	T		S																T	T			G	G	G																							T
Template Predicted Secondary structure														.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		P	P	H	C	D	V	T	H	L	A	E	F	L	N	.	.	.	.	.	.	C	I	I	Q	G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E	L	V	K
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	E	F	L	D	T	V	S	T	A	W	E	G	L	D	P	D	A	Y	P	F	T	R	A	V	A	D	Q	V	R	G	H	D	D	R	E	Q	F	L	A	G	I	T	L	V	L	T	G	I	T	A	L	H	R
Template Known Secondary structure															T	S		T	T	T												T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions