Job Description P75952 Confidence 99.73% Date Thu Jan 5 12:16:21 GMT 2012 Rank 109 Aligned Residues 169 % Identity 21% Template c2guhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of the putative tetr-family transcriptional2 regulator from rhodococcus sp. rha1 Resolution 1.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	K	V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.
Template Sequence		R	T	A	E	Q	S	R	S	L	I	V	D	A	A	G	R	A	F	A	T	R	P	Y	R	E	I	T	L	K	D	I	A	E	D	A	G	V	S	A	P	L	I	I	K	Y	F	G	S	K	E	Q	L	F	D	A	L	V	D	F	R	A	A	A	E	I	V	.	.	.	.	.	.	.	F	S	G	P	L	D	G
Template Known Secondary structure																						S		G	G	G											T	S										S	S									T										.	.	.	.	.	.	.	T		S		S	T	T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	E	F	L
Query Conservation
Alig confidence			.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	G	E	R	X	V	S	X	F	A	R	P	L	E	P	Y	K	P	L	S	L	N	I	L	F	X	S	G	P	S	E	E	S	S	R	K	L	R	A	N	Y	S	A	Q	X	I	D	A	L	A	E	R	L	.	.	.	.	.	.	.	.	.	.	P	G	R	D	A	R	L	R	A	E	L	V
Template Known Secondary structure			.	.	.	.	.									T	S				T	T		S								T	T		T	T															T									.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure			.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.											.	140	.	.	.	.	.	.	.	.	.	150
		175	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		N	C	I	I	Q	G	M	S	I	S	A	R	E	.	.	.	.	.	.	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.
Template Conservation
Template Sequence		X	S	X	L	T	G	L	A	V	X	R	R	K	X	X	Q	E	H	A	T	G	T	P	E	E	V	V	A	H	Y	A	P	L	V	Q	E	L
Template Known Secondary structure														T	T	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions