Job Description P75952 Confidence 99.92% Date Thu Jan 5 12:16:21 GMT 2012 Rank 4 Aligned Residues 188 % Identity 16% Template c2g7sA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of transcriptional regulator, tetr family, from2 agrobacterium tumefaciens Resolution 1.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		N	P	Q	S	K	A	D	D	I	L	Q	C	A	R	T	L	I	I	R	G	G	Y	N	S	F	S	Y	A	D	I	S	Q	V	V	G	I	R	N	A	S	I	H	H	H	F	P	S	K	S	D	L	V	C	K	L	V	S	Q	Y	R	Q	E	A	E	A	G	I	A	E	L	E	K	N	I	S	.	D	P	L	E
Template Known Secondary structure																							G	G	G																						S	S																													.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	E	F	L	N
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		Q	L	R	A	Y	I	G	Y	W	E	G	C	I	A	D	A	T	H	P	F	C	V	.	C	A	L	L	A	S	E	I	P	V	L	P	E	T	V	V	L	E	V	R	A	H	F	R	S	L	S	D	W	L	T	A	V	L	E	R	G	I	A	Q	G	R	L	V	L	T	G	T	A	R	A	N	A	E	I	F	X
Template Known Secondary structure																		S	S		S			.						T	T	G	G	G	S																													T	T		B			S	S
Template Predicted Secondary structure																								.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	I	Q	G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	V	H	G	A	X	L	S	A	R	A	H	G	D	A	A	T	F	G	A	I	T	R	P	X	L	E	R	I
Template Known Secondary structure													S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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