Return to main results Retrieve Phyre Job Id

Job DescriptionP75952
Confidence99.86%DateThu Jan 5 12:16:21 GMT 2012
Rank47Aligned Residues181
% Identity14%Templatec2fq4A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of the transcriptional regulator (tetr family)2 from bacillus cereus
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  PKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVES
Query Conservation   
   
  

 

  
    
    

  

  



    
  
 

  

                            
Alig confidence 
































































......








Template Conservation 
   

  

 

  
    
    

  

  



  


  
 


 
              ......         
Template Sequence  RNIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVVXDGFLSAAAARLP. . . . . . VPDTGSALN
Template Known Secondary structure 


TTT

T


SSS




......



S
Template Predicted Secondary structure 

















......




Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70... ......80..
 
   96...100.........110.........120.........130.........140.........150.........160.........170.....
Predicted Secondary structure 












Query SS confidence 















































































Query Sequence  ALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLN
Query Conservation                                                          
      
           
    
Alig confidence 

















...


























































Template Conservation                    ...                                   
      
                
Template Sequence  DILIHATSLANFLISREG. . . TIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIELSIDLIY
Template Known Secondary structure  STTT...TTT
TTT
S
TT

Template Predicted Secondary structure 


...











Template SS confidence 















































































   83......90.........100 .........110.........120.........130.........140.........150.........
 
   176...180.........190.........200.....
Predicted Secondary structure 




Query SS confidence 





























Query Sequence  CIIQGMSISAREGASLEKLMQIAGTTLRLW
Query Conservation      
           
 
   
   
  
Alig confidence 





























Template Conservation                            
 

Template Sequence  GPIFYRLLVTGEKLDDSYVHDLVINAFEGI
Template Known Secondary structure  TT





S
Template Predicted Secondary structure 






Template SS confidence 





























   160.........170.........180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions