Job Description P75952 Confidence 99.81% Date Thu Jan 5 12:16:21 GMT 2012 Rank 77 Aligned Residues 173 % Identity 14% Template c1zk8A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator from bacillus cereus2 atcc 14579 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L	A
Query Conservation
Alig confidence																																																																							.	.
Template Conservation																																																																							.	.
Template Sequence		L	T	L	Q	K	I	V	E	T	A	A	E	I	A	D	A	N	G	V	Q	E	V	T	L	A	S	L	A	Q	T	L	G	V	R	S	P	S	L	Y	N	H	V	K	G	L	Q	D	V	R	K	N	L	G	I	Y	G	I	K	K	L	H	N	R	L	E	E	A	A	E	.	.	D	K	R	X	D	E	A	I	H
Template Known Secondary structure																				G	G	G											T	S						T	T	T		S	S																									T	.	.	T
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	E	F	L	N	C	I	I
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		A	L	G	E	A	Y	V	A	F	V	R	K	H	P	G	L	Y	E	A	T	F	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	R	K	A	G	D	G	I	V	K	L	C	L	Q	V	L	Q	Q	Y	G	L	E	G	E	.	N	A	L	H	A	T	R	G	F	R	S	I	C
Template Known Secondary structure																					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			G	G	G	T					.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		Q	G	M	S	I	S	A	R	E	G	.	.	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E	L	V	K
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		H	G	F	A	S	I	E	Q	Q	G	G	F	G	L	P	L	D	L	D	I	S	L	H	V	L	L	E	T	F	I	K	G	L	R
Template Known Secondary structure											T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions