Job Description P75952 Confidence 99.75% Date Thu Jan 5 12:16:21 GMT 2012 Rank 103 Aligned Residues 187 % Identity 11% Template c1z0xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family from2 enterococcus faecalis v583 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	.	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A
Query Conservation																			.
Alig confidence																			.																																													.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		K	L	S	K	D	T	I	I	A	A	A	F	S	L	L	E	K	S	P	T	L	E	Q	L	S	X	R	K	V	A	K	Q	L	G	V	Q	A	P	A	I	Y	W	Y	F	K	N	K	Q	A	L	L	Q	S	X	A	E	A	I	E	E	H	F	.	.	.	.	.	.	Q	E	P	A	L	C	G	E	W	Y	S	D
Template Known Secondary structure				S															S			G	G	G											T	S							T	T		S	S															T		.	.	.	.	.	.							S
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	A	F	X	E	N	Y	Y	D	L	Y	Q	Q	F	P	C	A	V	A	I	E	I	Q	T	V	P	A	Y	P	Q	R	L	R	H	L	N	Q	X	X	G	I	L	R	E	A	G	F	S	P	E	X	T	H	L	A	V	T	S	L	Q	H	L	L	F	G	X	I	X	D	A	T	E	E	K	Q	L	V	S	Q
Template Known Secondary structure																S	T	T							T	S				S																	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		I	P	P	H	C	D	V	T	H	L	A	E	F	L	N	C	I	I	Q	G	M	.	.	.	.	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E	L	V	K
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		V	L	N	G	D	D	Y	L	K	E	Q	V	L	H	X	K	Q	Y	V	S	D	N	E	L	T	Y	X	E	E	S	I	Q	F	H	S	I	H	Q	K	S	A	F	I	Q	A	V	K	T	Y	L	D	G	L	Q
Template Known Secondary structure				T	T																		T	T									T			G	G	G	S																T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions