Job Description P75952 Confidence 99.70% Date Thu Jan 5 12:16:21 GMT 2012 Rank 115 Aligned Residues 162 % Identity 16% Template c1bjzA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:tetracycline repressor; PDBTitle: tetracycline chelated mg2+-ion initiates helix unwinding for tet2 repressor induction Resolution 2.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L
Query Conservation
Alig confidence																																																																	.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		R	L	N	R	E	S	V	I	D	A	A	L	E	L	L	N	E	T	G	I	D	G	L	T	T	R	K	L	A	Q	K	L	G	I	E	Q	P	T	L	Y	W	H	V	K	N	K	R	A	L	L	D	A	L	A	V	E	I	L	A	R	H	H	D	.	.	.	Y	S	L	P	A	A	G	E	S	W	Q	S	F	L
Template Known Secondary structure			S	S																														T	S																													T	.	.	.	T	S	S			T	T
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	E	F	L	N	C	I
Query Conservation
Alig confidence																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	N	A	M	S	F	R	R	A	L	L	R	Y	R	D	G	A	K	V	H	L	.	.	.	.	.	.	G	T	R	P	D	E	K	Q	Y	D	T	V	E	T	Q	L	R	F	M	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	F	S	L	R	D	G	L	Y	A	I	S	A	V	S	H	F
Template Known Secondary structure														T	S	T	T							.	.	.	.	.	.	T	S																				.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.														.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	G	A	V	L	E	Q	Q	E	H	N	L	P	P	L	L	R	E	A	L	Q	I	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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