Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9M0
Confidence99.57%DateThu Jan 5 11:10:41 GMT 2012
Rank76Aligned Residues216
% Identity19%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   322.......330.........340.........350.........360.........370.. .......380.........390.....
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Query Sequence  TDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKA. . . . . . TGRKYVRMALGGVRDEAEIRGHR
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Template Sequence  DEVTAQDHAVTVLKKTL. . . . . . KSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV
Template Known Secondary structure  TT

S

TTT......T
TT



STTSSTTS
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TT
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   37..40.........50... ......60.........70.........80.........90.........100.........110
 
   396...400.........410........ .420.........430.........440.........450.........460.........470...
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Query Sequence  RTYIGSMPGKLIQKMAKVGVKNP. . LFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN
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Template Sequence  KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSM. . . . TADAQSALRRTMETYS. . . . . . . . . . . . . . . GVTRFCLICN
Template Known Secondary structure  S





TTS


S
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   111........120.........130.........140..... ....150.........160. ........170.
 
   474.. ...480.........490.........500.........510.........520.........530.........540.........550..
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Query Sequence  SMN. IPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLC
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Template Sequence  YVTRIIDPLASQCSKFRFKALDASNAIDRLRFI. . . . . . . . . . SEQENVKCDDGVLERILDIS. . AGDLRRGITLLQSAS
Template Known Secondary structure 
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   172.......180.........190.........200.... .....210.........220.... .....230.........
 
   553......560.........570.........580
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Query Sequence  RKAVKQLLLDKSLKHIEINGDNLHDYLG
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Template Sequence  KGAQYLGDGKN. . . . . . ITSTQVEELAG
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   240.........250 .........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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