Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9M0
Confidence99.73%DateThu Jan 5 11:10:41 GMT 2012
Rank49Aligned Residues227
% Identity17%Templated1lv7a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   322.......330.........340.........350 .........360.........370.........380.........390.........400
Predicted Secondary structure 









.





















Query SS confidence 




























.

















































Query Sequence  TDHYGLERVKDRILEYLAVQSRVNKIKGP. ILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIG
Query Conservation      
    
  
 
              .  

 







 

  

  
                 
 
    


Alig confidence 




























.




































.........



Template Conservation    


 
  
  
   
              


 







 

  

                 .........    
Template Sequence  ADVAGCDEAKEEVAELVEYLREPSRFKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE. . . . . . . . . MFVG
Template Known Secondary structure  GGS
S
T
GGG






TTS
T


S
SSTT.........S


Template Predicted Secondary structure 





























.........



Template SS confidence 















































































   155....160.........170.........180.........190.........200.........210.........220. ....
 
   401........410........ .420.........430.........440.........450.........460.........470...... ..
Predicted Secondary structure 







.






























.

Query SS confidence 

















.

























































.

Query Sequence  SMPGKLIQKMAKVGVKNP. LFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMN. IP
Query Conservation     
 
   
       
.








            

  

  
     
       
 
 
  
 
 
   .
 
Alig confidence 

















.


























...



























.

Template Conservation       
      
                                 ...                    
          
Template Sequence  VGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ. . . TLNQMLVEMDGFEGNEGIIVIAATNRPDVLD
Template Known Secondary structure 

TT
STTT


STTS

TT
...T

SSS
S
TTTS
Template Predicted Secondary structure 















...













Template SS confidence 















































































   231........240.........250.........260.........270...... ...280.........290.........300.......
 
   479480..... ....490.........500.........510.........520.........530.........540.........550.....
Predicted Secondary structure 

...





















Query SS confidence 






. . .





































































Query Sequence  APLLDRM. . . EVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKA
Query Conservation    

 
 ...  
        
   
                     
    
  
   
    
 
 
 
 
  
 
  
Alig confidence 






...




















........





















........










Template Conservation                            
    ........             

  
 
 
........  

  
   
Template Sequence  PALLRPGRFDRQVVVGLPDVRGREQILKVHM. . . . . . . . RRVPLAPDIDAAIIARGTPGFS. . . . . . . . GADLANLVNEA
Template Known Secondary structure  GGGGSTTSS





........TTS
B
TT

T
TT

........
Template Predicted Secondary structure 







........













........
Template SS confidence 















































































   308.310.........320.........330........ .340.........350.........360 .........370.
 
   556...560.........570.........
Predicted Secondary structure 





Query SS confidence 























Query Sequence  VKQLLLDKSLKHIEINGDNLHDYL
Query Conservation                
    
   
Alig confidence 









...










Template Conservation     
      ... 
   
   

Template Sequence  ALFAARGNKR. . . VVSMVEFEKAK
Template Known Secondary structure  TT
S...SB
Template Predicted Secondary structure 



...


Template SS confidence 























   372.......380. ........390..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions