Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9M0
Confidence99.74%DateThu Jan 5 11:10:41 GMT 2012
Rank47Aligned Residues233
% Identity19%Templated1e32a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   322.......330........ .340.........350.........360.........370.........380.........390....
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Query Sequence  TDHYGLERVKDRILEYL. . . . . . . AVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGH
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Template Sequence  DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS. . . . . . .
Template Known Secondary structure  GG

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   204.....210.........220.........230.........240.........250.........260.........270......
 
   395....400.........410........ .420.........430.........440.........450.........460.........470...
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Query Sequence  RRTYIGSMPGKLIQKMAKVGVKNP. LFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN
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Template Sequence  . . KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVS. . . . . . QLLTLMDGLKQRAHVIVMAATN
Template Known Secondary structure  ..S
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   277..280.........290.........300.........310.........320...... ...330.........340........
 
   474.....480..... ....490.........500.........510.........520.........530.........540.........
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Query Sequence  SMNIPAPLLDRM. . . . EVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREIS
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Template Sequence  RPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT. . . . . . . . KNMKLADDVDLEQVANETHGHVG. . . . ADLAALCS
Template Known Secondary structure 
GGGS
GGGTSTTSS





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   349350.........360.........370.........380..... ....390.........400........ .410......
 
   550.........560..... ....570.........580.
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Query Sequence  KLCRKAVKQLLLDKSL. . . . . . . . . . KHIEINGDNLHDYLGV
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Template Sequence  EAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
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   417..420.........430.........440.........450........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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