Job Description P0A9M0 Confidence 99.55% Date Thu Jan 5 11:10:41 GMT 2012 Rank 77 Aligned Residues 244 % Identity 10% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.									.	.	.	380	.	.
Predicted Secondary structure																														.	.	.	.																																			.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.																																			.	.	.	.	.	.	.	.
Query Sequence		Q	A	Q	E	I	L	D	T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	.	.	.	.	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	.	.	.	.	.	.	.	.	Y	V	R	M	A	L
Query Conservation																														.	.	.	.																																			.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	E	E	S	I	R	E	S	L	Q	K	R	E	L	L	K	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I
Template Known Secondary structure																																					T	T												S																	T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
		383	.	.	.	.	.	.	390									.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.
Query Sequence		G	G	V	R	D	E	A	E	.	.	.	.	.	.	.	.	I	R	G	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D
Query Conservation										.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																																										.	.	.															.	.	.	.	.	.
Template Conservation																																																											.	.	.															.	.	.	.	.	.
Template Sequence		D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	.	.	.	K	I	L	Q	Y	F	E	K	W	I	S	S	K	N	.	.	.	.	.	.
Template Known Secondary structure			T	T															S																		S		G	G	G	S											S	S	S			T	.	.	.													S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.															.	.	.	.	.	.
Template SS confidence
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670				.	.	.	.	.	.	.	.	.	680	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.								.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	L	E	V	D	Y	D	L	S	D	V	M	F	V	A	T	S	N	S	M	N	I	P	A	P	L	L	D	R	M	.	.	.	.	.	.	.	E	V	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	S	K	L	S	I	I	C	V	G	G	H	N	V	T	I	R	E	Q	I	N	I	X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	V	D	K	N	E	L	Q	Q	X	I	I	T	.	.	.	.	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.											S	S									T						T	T																					.	.	.	.															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template SS confidence
											689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.					.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
											516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.							.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A	G	V	R	G	L	E	R	E	I	S	K	L	C	R	K	A	V	K	Q	L	L	L	.	.	.	.	.	.	D	K	S	L	K	H	I	E	I	N	G	D	N	L	H	D	Y	L	G
Query Conservation		.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																											.	.	.																		.	.	.	.	.	.
Template Conservation																																					.	.	.
Template Sequence		T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I	T	Q	L	I	A	K	N	V	A	N	V	S	G	S	.	.	.	T	E	K	A	F	K	I	C	E	A	A	V	E	I	S	K	K	D	F	V	R	K	G	G	L	Q	K	G	K	L	V	V	S	Q	E	X	V	P	R	Y	F	S
Template Known Secondary structure									T	T																										S	.	.	.																							T	T			T	T					S					T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		756	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790				.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
		581	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		841	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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