Job Description P0A9M0 Confidence 99.84% Date Thu Jan 5 11:10:41 GMT 2012 Rank 32 Aligned Residues 203 % Identity 21% Template c3pfiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate Resolution 2.69 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G	H	R	R	T	Y	I	G	S
Query Conservation
Alig confidence																																.																																										.	.	.	.	.	.	.	.
Template Conservation																																.																																										.	.	.	.	.	.	.	.
Template Sequence		D	G	Y	I	G	Q	E	S	I	K	K	N	L	N	V	F	I	A	A	A	K	K	R	N	E	C	L	D	H	I	.	L	F	S	G	P	A	G	L	G	K	T	T	L	A	N	I	I	S	Y	E	X	S	A	N	I	K	T	T	A	A	P	X	I	E	K	S	G	D	L	A	A	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			S																		T	T							.				S	S	T	T	S	S												T	T								G	G	G			S	S						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.																																										.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M	F	V	A	T	S	N	S	M	N	I	P	A	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																				.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	L	T	N	L	S	E	G	D	I	L	F	I	D	E	I	H	R	L	.	.	.	.	S	P	A	I	E	E	V	L	Y	P	A	X	E	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	T	L	I	G	A	T	T	R	A	G	X	L	S	N	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.				T			T	T							S	G	G	G		.	.	.	.														T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																				.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		482	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	D	R	M	E	V	.	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A	G	V	R	G	L	E	R	E	I	S	K	L	C	R	K	A	V	K	Q	L	L
Query Conservation								.
Alig confidence								.																						.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		R	D	R	F	G	X	Q	F	R	L	E	F	Y	K	D	S	E	L	A	L	I	L	Q	K	A	A	L	K	.	.	.	.	.	.	.	.	.	.	L	N	K	T	C	E	E	K	A	A	L	E	I	A	K	R	S	R	.	.	S	T	P	R	I	A	L	R	L	L	K	R	V	R	D	F	A	D	V	N	D	E
Template Known Secondary structure			T	T		S																								.	.	.	.	.	.	.	.	.	.	T	T															T	T	.	.	T																			T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	S	L	K	H	I	E	I	N	G	D	N	L	H	D	Y	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		E	.	.	.	.	.	.	.	I	I	T	E	K	R	A	N	E	A	L
Template Known Secondary structure		S	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		237								.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions