Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9M0
Confidence99.73%DateThu Jan 5 11:10:41 GMT 2012
Rank50Aligned Residues217
% Identity17%Templatec3nbxX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:atpase rava; PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   310.........320.........330.........340.........350.........360.........370... ......380........
Predicted Secondary structure 
















.





Query SS confidence 































































.














Query Sequence  KKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKAT. GRKYVRMALGGVRDE
Query Conservation     
      
     
    
  
 
                

 







 

  

  
.               
Alig confidence 































........























.














Template Conservation   


  
   
   
 

   
 
 
 
 

 ........  


 
 





 


 

             
    
Template Sequence  AERISRLSSSLEKGLYERSHAIRLCLLAALSG. . . . . . . . ESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTP
Template Known Secondary structure  TT
SS
T........


SSSSGGGGBSS



TT

Template Predicted Secondary structure 





........
















Template SS confidence 















































































   8.10.........20.........30......... 40.........50.........60.........70.........
 
   389390.........400.........410.........420.........430.........440.........450.........460........
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  AEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMF
Query Conservation    
 
    


   
 
   
       









            

  

  
     
       
 
 
  
Alig confidence 














......




....









....












...















.


Template Conservation   

 
        
 ......
  
 ....
 




  
....    
 


  
 ...

          

  .  
Template Sequence  EEVFGPLSERLTSGY. . . . . . LPEAE. . . . IVFLDEIWKA. . . . GPAILNTLLTAIN. . . ERQFRNGAHVEKIPMR. LLV
Template Known Secondary structure 

B

B

TTS......GGG
S....SGGG
....
...SS
SSS



.
Template Predicted Secondary structure 









......




....



....

...







.
Template SS confidence 















































































   80.........90.... ..... 100......... 110.........120.. .......130........ .140.
 
   469470...... ...480....... ..490.........500.........510.........520.........530.........540....
Predicted Secondary structure 




...




.




















Query SS confidence 







. . .










.
























































Query Sequence  VATSNSMN. . . IPAPLLDRMEV. IRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGL
Query Conservation 
 
 
   ...
   

 
   .
        
   
                     
    
  
   
    
 
 
Alig confidence 







...










.














...






































Template Conservation 




 

    











 
           
...
                

 


   
  
  
 
   
Template Sequence  AASNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSM. . . LTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHV
Template Known Secondary structure  SS


TT
TTTT



S


...T



TTS

S
TTTSB
TT
B

Template Predicted Secondary structure 















...





















Template SS confidence 















































































   152.......160.........170.........180......... 190.........200.........210.........220........
 
   545....550.....
Predicted Secondary structure 
Query SS confidence 










Query Sequence  EREISKLCRKA
Query Conservation   
 
  
 
  
Alig confidence 










Template Conservation   
 
  
   
Template Sequence  FELIFMLRQQL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 










   229230.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions