Job Description P0A9M0 Confidence 99.82% Date Thu Jan 5 11:10:41 GMT 2012 Rank 37 Aligned Residues 217 % Identity 23% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.								.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	.	.	.	.	.	.	.	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G	H
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	N	A	T	F	I	R	V	V	G	S	E	L	V	K	.	.	.	.	.	.	.
Template Known Secondary structure		G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												T	T								G	G	G	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.											.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																										.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	.	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	.	.	.	.	.	.	.	.	.	.	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L
Query Conservation																										.																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																							.																		.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	A	R
Template Known Secondary structure		.	.		S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S
Template Predicted Secondary structure		.	.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.														.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.		.	.	.	480	.	.	.	.	.				.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.										.	.	.
Query SS confidence															.										.	.	.
Query Sequence		S	D	V	M	F	V	A	T	S	N	S	M	N	.	I	P	A	P	L	L	D	R	M	.	.	.	E	V	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A
Query Conservation															.										.	.	.
Alig confidence															.										.	.	.																								.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		G	D	V	K	I	I	G	A	T	N	R	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L	K	I	H	T	R	K	.	.	.	.	.	.	.	.	M	N	L	A	E	D	V	N	L	E	E	I	A	K	M	T	E	G	C	V	.	.	.
Template Known Secondary structure		S	S								S	S	G	G	G	B						S	T	T	S																						T	T	T	T	.	.	.	.	.	.	.	.	S		B		S	S								T	T	S	T	T			.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.									.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	R	G	L	E	R	E	I	S	K	L	C	R	K	A	V	K	Q	L	L	L	D	K	S	L	K	H	I	E	I	N	G	D	N	L	H	D	Y	L
Query Conservation
Alig confidence		.	.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.																							.	.	.
Template Sequence		.	.	.	.	.	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	.	.	.	V	T	M	D	D	F	R	K	A	V
Template Known Secondary structure		.	.	.	.	.																		T	T		S	S	.	.	.	B
Template Predicted Secondary structure		.	.	.	.	.																							.	.	.
Template SS confidence
							377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.				.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions