Job Description P0A9M0 Confidence 95.54% Date Thu Jan 5 11:10:41 GMT 2012 Rank 323 Aligned Residues 99 % Identity 18% Template c2xgjA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance Resolution 2.90 Å

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.									.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.													.	.	.	.	.
Predicted Secondary structure																				.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	.	Q	S	I	A	K	A	T	G	R	K	Y	V	R	M	A	L	G	G	V	.	.	.	.	.	.	.	.	R	D	E	A	E	I	R	G	H	R	R	T	Y	I	G	S	M	.	.	.	.	.	.	.	.	.	.	.	.	P	G	K	L	I
Query Conservation																				.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	S	V	L	V	S	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	Q	S	L	K	N	K	Q	R	V	I	Y	T	S	P	I	K	A	L	S	N	Q	K	Y	R	E	L	L	A	E	F	G	D	V	G	L	M	T	G	D	I	T	I	N	P	D	A	G	C	L	V	M	T	T	E	I	L	R
Template Known Secondary structure		T									T	T	S																T	T								S	S																S							S	S					T	T		S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		408	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		Q	K	M	A	K	V	G	V	K	N	P	.	.	.	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		S	M	L	Y	R	G	S	E	V	M	R	E	V	A	W	V	I	F	D	E	V	H	Y	M	R	D	K	E	R	G	V	V	W	E	E	T	I	I	L	L	P	D	K
Template Known Secondary structure							T		T	T	G	G	G								T	G	G	G	G	G		T	T	T											S		T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions