Job Description P0A9M0 Confidence 97.65% Date Thu Jan 5 11:10:41 GMT 2012 Rank 133 Aligned Residues 142 % Identity 20% Template c2v9pH_ PDB info PDB header:hydrolase Chain: H: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 dna-free form Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	A	Q	E	I	L	D	T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.																																				.	.	.	.	.	.	.
Template Sequence		K	S	I	L	T	F	F	N	Y	Q	N	I	E	L	I	T	F	I	N	A	L	K	L	W	L	K	G	I	P	K	K	N	C	.	.	.	.	.	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	G	G	S	V	L	S	F	A	N	H	K	S	H	.	.	.	.	.	.	.
Template Known Secondary structure											T	T																T		T	T		S		.	.	.	.	.						S	S	S	S	S													T						G	G	G	T	T	S	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.																																				.	.	.	.	.	.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.						.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																											.								.	.	.	.	.
Query SS confidence																											.								.	.	.	.	.
Query Sequence		H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	.	L	F	L	L	D	E	I	.	.	.	.	.	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M
Query Conservation																											.								.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.								.	.	.	.	.				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	W	L	A	S	L	A	D	T	R	A	A	L	V	D	D	A	T	H	A	C	W	R	Y	F	.	.	.	.	.	.	.	.	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	G	G	G	G	T		S						S										.	.	.	.	.	.	.	.									T	T								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
																		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.									.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
		468	.	470	.	.	.	.	.					.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		F	V	A	T	S	N	S	M	.	.	.	.	N	I	P	A	P	L	L	D	R	M	E	V	I	R	L	S	G	Y
Query Conservation										.	.	.	.
Alig confidence			.	.						.	.	.	.
Template Conservation			.	.
Template Sequence		V	.	.	T	S	N	I	D	V	Q	A	E	D	R	Y	L	Y	L	H	S	R	V	Q	T	F	R	F	E	Q	P
Template Known Secondary structure			.	.			S	S		G	G	G		G	G	G	G	G	G	T	T	T								S
Template Predicted Secondary structure			.	.
Template SS confidence
		520			.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions