Job Description P0A9M0 Confidence 99.15% Date Thu Jan 5 11:10:41 GMT 2012 Rank 99 Aligned Residues 222 % Identity 18% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.												.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	.	.	.	.	.	.	.	.	.	.	.	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																							.	.																														.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																							.	.
Template Sequence		K	E	I	P	F	R	E	D	I	L	R	D	A	A	I	A	I	R	Y	F	V	.	.	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C	R	E	V	G	G	T	P	Q
Template Known Secondary structure		S	S		T	T																	.	.	T	T												T	T	S	S																			S	S	S	S	T	T													S
Template Predicted Secondary structure																							.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
								388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure		.	.	.	.	.	.																																.
Query SS confidence		.	.	.	.	.	.																																.
Query Sequence		.	.	.	.	.	.	E	A	E	I	R	G	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	.	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D
Query Conservation		.	.	.	.	.	.																																.
Alig confidence		.	.	.	.	.	.																																.													.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	L	S	S	L	A	G	K	L	T	G	F	S	V	P	K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	.	.	R	R	G	G	D	I	V	L	Y	Q	L	L	R	S	D	A	N	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S				S	S	S	S		T												S	S	S								T	T						.	.	S	T	T	S									T	S	S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.					.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.												.
Query SS confidence																		.	.	.	.												.
Query Sequence		Y	D	L	S	D	V	M	F	V	A	T	S	N	S	M	N	.	.	.	.	I	P	A	P	L	L	D	R	M	E	V	.	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y
Query Conservation																		.	.	.	.												.
Alig confidence		.	.	.	.	.												.	.	.	.												.																						.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	I	S	V	I	M	I	S	N	D	I	N	V	R	D	Y	M	E	P	R	V	L	S	S	L	G	P	S	V	I	F	K	P	Y	D	A	E	Q	L	K	F	I	L	S	K	Y	A	E	Y	.	.	.	.	.	.	.	.	G	L	I	K	G	T	Y	D	D	E	I	L	S	Y	I	A	A	I	S
Template Known Secondary structure		.	.	.	.	.								S	S	T	T	T	T	T	T	S							T																										.	.	.	.	.	.	.	.	T	S		T	T	S			S
Template Predicted Secondary structure		.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template SS confidence
							175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.									.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	A	G	V	R	G	L	E	R	E	I	S	K	L	C	R	K	A	V	K	Q	L	L	L	D	K	S	L	K	H	I	E	I	N	G	D	N	L	H	D	Y	L
Query Conservation
Alig confidence		.	.	.																										.	.	.	.	.
Template Conservation		.	.	.																										.	.	.	.	.
Template Sequence		.	.	.	A	K	E	H	G	D	A	R	K	A	V	N	L	L	F	R	A	A	Q	L	A	S	G	G	G	.	.	.	.	.	I	I	R	K	E	H	V	D	K	A	I
Template Known Secondary structure		.	.	.		T	T																		T	T	S	S	S	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																										.	.	.	.	.
Template SS confidence
					242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions