Job Description P0A9M0 Confidence 97.53% Date Thu Jan 5 11:10:41 GMT 2012 Rank 143 Aligned Residues 138 % Identity 17% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	E	A	L	K	R	K	I	D	A	A	K	M	P	K	E	A	K	E	K	A	E	A	E	L	Q	K	L	K	M	M	S	P	M	S	A	E	A	T	V	V	R	G	Y	I	D	W	M	V	Q	V	P	W	N	A	R	S	K	V	K	K	D	L	R	Q	A	Q	E	I	L	D	T	D	H	Y	G	L	E
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	L	R	K	A	E	K	L	L	Q	E	T	G	I	K	E	S	T	K	T	N	T	L	K	K	L	L	R	F	S	V	E	A	G	G	L	T	E	E	N	V	V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	S														T					S	S	S				S	S	S												T	S			S	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.									.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	.	.	.	.	G	R	K	Y	V	R	M	A	L	G	G	V	.	.	.	.	.	.	.	.	R	D	E	A	E	I	R	G	H	R	R
Query Conservation																																															.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L	Q	A	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		S	S	B							S	S	S																T	S												S	S	T	T	T	T					T					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	L	F	L	L	D
Query Conservation
Alig confidence		.																					.
Template Conservation		.																					.
Template Sequence		.	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	E	L	F	S	E	Y	D	.	H	V	F	V	D
Template Known Secondary structure		.				S	S										T	T	T	T	S	S	.
Template Predicted Secondary structure		.																					.
Template SS confidence
			235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions