Job Description P0A9M0 Confidence 99.00% Date Thu Jan 5 11:10:41 GMT 2012 Rank 102 Aligned Residues 117 % Identity 18% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		E	L	V	Y	V	L	R	H	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	E	A	G	K	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	I	D	A	A	S	M	P	L	T	D	A	A	F	E	A	E	.	.	.	.
Template Known Secondary structure													S						S	S	S	T	T	T	T													T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	S				G	G	G	G	G		S	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.					.	.	.	480	.	.	.	.				.	.	.	.	.	490	.
Predicted Secondary structure																																																												.	.	.	.									.	.	.
Query SS confidence																																																												.	.	.	.									.	.	.
Query Sequence		L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M	F	V	A	T	S	N	S	M	N	.	.	.	.	I	P	A	P	L	L	D	R	.	.	.	M	E	V	I	R	L	S
Query Conservation																																																												.	.	.	.									.	.	.
Alig confidence												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.									.	.	.
Template Conservation												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	A	V	D	Q	V	E	K	L	.	.	.	.	G	N	E	E	Q	A	L	L	F	S	I	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	R	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	Q	Q	L	V	I	R	E	D	L	R	T	R	M	A	Y	C	L	V	Y	E	V	K
Template Known Secondary structure							S	T	T			.	.	.	.		S												.	.	.	.	.	.	.	.	.	.	.	.	.						T									S	S		T	T	T	S	S									G	G	G	S
Template Predicted Secondary structure												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		492
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		149

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions