Job Description P0A9M0 Confidence 94.20% Date Thu Jan 5 11:10:41 GMT 2012 Rank 390 Aligned Residues 141 % Identity 16% Template c2iutA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:dna translocase ftsk; PDBTitle: p. aeruginosa ftsk motor domain, dimeric Resolution 2.25 Å

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		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.								.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.																		.	.																				.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.																		.	.																				.	.	.	.	.	.
Query Sequence		K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	.	.	.	.	.	.	.	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G	.	.	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.																		.	.																				.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.										.								.	.																				.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		K	M	P	H	L	L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	L	L	S	I	L	F	K	S	T	P	S	E	A	R	L	I	M	I	D	P	K	M	L	.	E	L	S	I	Y	E	G	I	P	H	L	L	C	P	V	V	T	D	M	K	E	A	A	N	A	L	R	W	S	V	A	E	M	E
Template Known Secondary structure		G	S									T	T	S	S														T	T			T	T	T								S	S	S		.				T	T	T	T		T	T	B	S	S	S		B
Template Predicted Secondary structure																																															.
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.		.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
																																																413	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	V	K	N	P	.	.	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation
Template Sequence		R	R	Y	R	L	M	A	A	M	G	V	R	N	L	A	G	F	N	R	K	V	K	D	A	E	E	A	G	T	P	L	T	D	P	L	F	R	R	E	S	P	D	D	E	P	P	Q	L	S	T	L	P	T	I	V	V	V	V	D	E	F	A	D	M	M	M	I	V	G	K	K	V	E	E	L	I	A	R	I	A
Template Known Secondary structure											T		S	S														T	T				B		T	T					S	T	T					B												S			T	T					T
Template Predicted Secondary structure
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure																																		.	.												.
Query SS confidence																																		.	.												.
Query Sequence		D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M	F	V	A	T	S	N	S	M	N	.	.	I	P	A	P	L	L	D	R	M	E	V	.	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A
Query Conservation																																		.	.												.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.								.	.												.	.												.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	K	A	R	A	A	G	I	.	.	H	L	I	L	A	T	Q	R	P	S	V	D	V	I	T	G	L	I	K	A	N	I	P	T	R	I	A	F	Q	V	S	S	K	I	D	S	R	T	I	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.			T	T	T	T		.	.							S				T	T	T	S							T										S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		617												.	.	620	.	.	.	.			.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions