Job Description P0A9M0 Confidence 99.59% Date Thu Jan 5 11:10:41 GMT 2012 Rank 72 Aligned Residues 181 % Identity 18% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	.	.	.	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		Y	E	V	V	K	E	A	L	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S	S	A	D	D	F	A	Q	.	.	.	.	.	.	.	.	.	A	M	V	E	H	L	K	K	G	T	I	N	E	F	R
Template Known Secondary structure								T	T	T	T	T	T	T	S									S	S	S	S	S															T	T														.	.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.										.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.					.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.										.	.
Query SS confidence																																																																			.	.	.	.										.	.
Query Sequence		K	V	G	V	K	N	P	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M	F	V	A	T	S	N	S	M	N	.	.	.	.	I	P	A	P	L	L	D	R	M	.	.
Query Conservation																																																																			.	.	.	.										.	.
Alig confidence																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.										.	.
Template Conservation																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	M	Y	K	S	V	D	L	L	L	L	D	D	V	Q	F	L	S	G	.	.	K	E	R	T	Q	I	E	F	F	H	I	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Y	L	L	E	K	Q	I	I	L	A	S	D	R	H	P	Q	K	L	D	G	V	S	D	R	L	V	S	R	F	E	G
Template Known Secondary structure						T		S							G	G	G	G	T	T	.	.		S												.	.	.	.	.	.	.	.	.	.	.	.	.					T	T								S	S		G	G	G		T	T	S
Template Predicted Secondary structure																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200														.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A	G	V	R	G	L	E	R	E	I	S	K	L	C
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		G	I	L	V	E	I	E	L	D	N	K	T	R	F	K	I	I	K	E	K	.	.	.	.	.	.	.	.	.	.	L	K	E	F	N	L	E	L	R	K	E	V	I	D	Y	L	L	E	N	T	.	.	.	K	N	V	R	E	I	E	G	K	I	K	L	I	K
Template Known Secondary structure		S									S											.	.	.	.	.	.	.	.	.	.				T	T																.	.	.		S												T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.											.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions