Job Description P0A9M0 Confidence 96.55% Date Thu Jan 5 11:10:41 GMT 2012 Rank 260 Aligned Residues 55 % Identity 36% Template c2gefA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protease vp4; PDBTitle: crystal structure of a novel viral protease with a2 serine/lysine catalytic dyad mechanism Resolution 2.20 Å

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		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	D	G	P	S	A	G	I	A	M	C	T	A	L	V	S	C	L	T	G	N	P	V	R	A	D	V	A	M	T	G	E	I	T	L	R	G	Q	V	L	P	I	G	G	L	K	E	K	L	L	A	A	H	R	G	G	I	K	T	V
Query Conservation
Alig confidence													.	.							.	.	.																.
Template Conservation													.	.							.	.	.																.
Template Sequence		A	V	A	G	Q	S	S	S	I	A	L	.	.	A	L	A	S	S	L	.	.	.	P	F	V	P	K	A	A	Y	T	G	C	L	S	G	T	.	N	V	Q	P	V	Q	F	G	N	L	K	A	R	A	A	H	K	I	G	L	P	L	V
Template Known Secondary structure					S	S	T	T					.	.							.	.	.	S	S			S	S								T	T	.					B	S											T	T	T
Template Predicted Secondary structure													.	.							.	.	.																.
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.			.	.	700	.	.	.				.	.	.	.	.	.	710	.	.	.	.	.	.	.	.		.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions