Job Description P0A9M0 Confidence 99.87% Date Thu Jan 5 11:10:41 GMT 2012 Rank 27 Aligned Residues 217 % Identity 21% Template c2dhrC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l) Resolution 3.90 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.							.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	.	.	.	.	.	.	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G	H	R
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	R	V	P	F	I	T	A	S	G	S	D	F	V	E	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S	S		S																		G	G	G	T	T	T	T	S					S							S	T	T	S	S												T	T								G	G	G	G	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.											.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																									.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	.	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	.	.	.	.	.	.	.	.	.	.	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S
Query Conservation																									.																				.	.	.	.	.	.	.	.	.	.
Alig confidence		.																							.																				.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	R	G	S	G	V	G	G	G	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	E	K	D	T
Template Known Secondary structure		.	S		T	T											T	T	S	T	T	S	S	S								G	G	G	T				S	S	S	S	T	T	T	S	S														G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G			S	S
Template Predicted Secondary structure		.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.														.	.	290	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.		.	.	.	480	.	.			.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure														.							.	.						.
Query SS confidence														.							.	.						.
Query Sequence		D	V	M	F	V	A	T	S	N	S	M	N	.	I	P	A	P	L	L	.	.	D	R	M	E	V	.	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A	G
Query Conservation														.							.	.						.
Alig confidence														.							.	.						.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	V	V	M	A	A	T	N	R	P	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	I	L	R	I	H	A	.	.	.	.	.	.	.	.	.	.	.	R	G	K	P	L	A	E	D	V	D	L	A	L	L	A	K	R	T	P	G	F	V	G
Template Known Secondary structure										S		G	G	G	S		T	T	T	S	S	T	T	S	S																					T	T	.	.	.	.	.	.	.	.	.	.	.	S	S	S					S	S	T	T					T	T	S		S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.												340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	G	L	E	R	E	I	S	K	L	C	R	K	A	V	K	Q	L	L	L	D	K	S	L	K	H	I	E	I	N	G	D	N	L	H	D	Y	L
Query Conservation
Alig confidence			.	.	.	.	.																				.	.	.
Template Conservation			.	.	.	.	.																				.	.	.
Template Sequence		A	.	.	.	.	.	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	.	.	.	K	I	T	M	K	D	L	E	E	A	A
Template Known Secondary structure			.	.	.	.	.																			S	.	.	.	S			S
Template Predicted Secondary structure			.	.	.	.	.																				.	.	.
Template SS confidence
		363						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.				.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions