Job Description P0A9M0 Confidence 100.00% Date Thu Jan 5 11:10:41 GMT 2012 Rank 6 Aligned Residues 441 % Identity 19% Template c1qvrB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb Resolution 3.00 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.									.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.
Query Sequence		D	N	G	E	H	F	S	A	K	A	E	Y	L	E	S	P	T	I	D	E	R	E	Q	E	V	L	V	R	T	A	I	S	Q	F	E	G	Y	I	K	L	N	K	K	I	P	P	E	V	L	T	S	L	N	S	I	D	D	.	.	.	.	.	.	.	.	P	A	R	L	A	D	T	I	A	A	H	M	P	L	K
Query Conservation																																																											.	.	.	.	.	.	.	.
Alig confidence																																										.	.																.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																										.	.																																				.	.	.
Template Sequence		E	K	D	P	A	L	E	R	R	F	Q	P	V	Y	V	D	E	P	T	V	E	E	T	I	S	I	L	R	G	L	K	E	K	Y	E	V	H	H	G	V	.	.	R	I	S	D	S	A	I	I	A	A	A	T	L	S	H	R	Y	I	T	E	R	R	L	P	D	K	A	I	D	L	I	D	E	A	A	.	.	.
Template Known Secondary structure		G	G						T	T																													T	T		.	.																				S	S															.	.	.
Template Predicted Secondary structure																																										.	.																																				.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	D	K	Q	S	V	L	E	M	S	D	V	N	E	R	L	E	Y	L	M	A	M	M	E	S	E	I	D	L	L	Q	V	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	R	N	R	V	K	K	Q	M	E	K	S	Q	R	E	Y	Y	L	N	E	Q	M	K	A	I	Q	K	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	L	R	M	A	L	E	S	A	P	E	E	I	D	A	L	E	R	K	K	L	Q	L	E	I	E	R	E	A	L	K	K	E	K	D	P	D	S	Q	E	R	L	K	A	I	E	A	E	I	A	K	L	T	E	E	I	A	K	L	R	A	E	W	E	R	E	R	E	I	L	R	K	L	R	E	A	Q	H	R
Template Known Secondary structure									T	S																							T	S	S			T	T	T	T											G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.																								.
Query SS confidence																																															.	.	.	.	.	.																								.
Query Sequence		L	G	E	M	D	D	A	P	D	E	N	E	A	L	K	R	K	I	D	A	A	K	M	P	K	E	A	K	E	K	A	E	A	E	L	Q	K	L	K	M	M	S	P	M	S	.	.	.	.	.	.	A	E	A	T	V	V	R	G	Y	I	D	W	M	V	Q	V	P	W	N	A	R	S	K	.	V	K	K	D	L
Query Conservation																																															.	.	.	.	.	.																								.
Alig confidence																																															.	.	.	.	.	.																								.
Template Conservation
Template Sequence		L	D	E	V	R	R	E	I	E	L	A	E	R	Q	Y	D	L	N	R	A	A	E	L	R	Y	G	E	L	P	K	L	E	A	E	V	E	A	L	S	E	K	L	R	G	A	R	F	V	R	L	E	V	T	E	E	D	I	A	E	I	V	S	R	W	T	G	I	P	V	S	K	L	L	E	G	E	R	E	K	L
Template Known Secondary structure																T										T	T															T	T	S	S		T	T																T	T	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.				.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.																																				.	.	.
Query SS confidence																												.	.	.																																				.	.	.
Query Sequence		R	Q	A	Q	E	I	L	D	T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	.	.	.	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	.	.	.	R	K	Y	V	R	M	A	L	G	G	V	R	D
Query Conservation																												.	.	.																																				.	.	.
Alig confidence																												.	.	.																																				.	.	.
Template Conservation
Template Sequence		L	R	L	E	E	E	L	H	K	R	V	V	G	Q	D	E	A	I	R	A	V	A	D	A	I	R	R	A	R	A	G	L	K	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	A	K	T	L	A	A	T	L	F	D	T	E	E	A	M	I	R	I	D	M	T	E	Y	M	E
Template Known Secondary structure			S							T	T	S		S																G	G	G	T	S		S	S	S		S						B	S	S	S	S	S	S														S	S	G	G	G						T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	E	I	R	G	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.												.	.											.	.	.	.														.	.	.									.
Template Conservation										.	.	.	.	.	.	.	.	.	.												.	.											.	.	.	.														.	.	.									.
Template Sequence		K	H	A	V	S	R	L	Q	.	.	.	.	.	.	.	.	.	.	L	T	E	A	V	R	R	R	P	Y	S	.	.	V	I	L	F	D	E	I	E	K	A	.	.	.	.	H	P	D	V	F	N	I	L	L	Q	I	L	D	.	.	.	D	G	R	L	T	D	S	H	.	G	R	T	V	D	F	R	N	T	V
Template Known Secondary structure		S	G	G	G	G	G			.	.	.	.	.	.	.	.	.	.									S	S		.	.					S	S	G	G	G	S	.	.	.	.													T	.	.	.	T	T					S	S	.	S						T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.												.	.											.	.	.	.														.	.	.									.
Template SS confidence
		630	.	.	.	.	.	.	.											.	.	640	.	.	.	.	.	.	.	.			.	650	.	.	.	.	.	.	.	.					.	660	.	.	.	.	.	.	.	.	.	670	.				.	.	.	.	.	.	.	.		680	.	.	.	.	.	.	.	.	.
		468	.	470	.	.	.																												.	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		F	V	A	T	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	N	I	P	A	P	L	L	D	R	M	.	E	V	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.
Template Conservation																																																																					.
Template Sequence		I	I	L	T	S	N	L	G	S	P	L	I	L	E	G	L	Q	K	G	W	P	Y	E	R	I	R	D	E	V	F	K	V	L	Q	Q	H	F	R	P	E	F	L	N	R	L	D	E	I	V	V	F	R	P	L	T	K	E	Q	I	R	Q	I	V	E	I	Q	L	.	S	Y	L	R	A	R	L	A	E	K	R	I
Template Known Secondary structure								T	T										T	T															T	T	T	S							T		S	B			B																		.									T	T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770		.	.	.	.	.	.	.	.	.	780	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.		.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560			.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																	.																	.											.	.
Query SS confidence																	.																	.											.	.
Query Sequence		E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	.	Y	T	R	E	A	G	V	R	G	L	E	R	E	I	S	K	.	L	C	R	K	A	V	K	Q	L	L	.	.	L	D	K	S	L	K	H	I	E	I	N
Query Conservation																	.																	.											.	.
Alig confidence																	.																	.											.	.
Template Conservation
Template Sequence		S	L	E	L	T	E	A	A	K	D	F	L	A	E	R	G	Y	D	P	V	F	G	A	R	P	L	R	R	V	I	Q	R	E	L	E	T	P	L	A	Q	K	I	L	A	G	E	V	K	E	G	D	R	V	Q	V	D
Template Known Secondary structure																			B	T	T	T	B	T	S										T											T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		783	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.