Job Description P0A9M0 Confidence 99.55% Date Thu Jan 5 11:10:41 GMT 2012 Rank 78 Aligned Residues 187 % Identity 24% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.						.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	G	R	K	.	.	.	.	.	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	R	G	H	R	R
Query Conservation																																																									.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	.	.	.	.	.	.	K	T	G	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E	K	V	K
Template Known Secondary structure		G	G			S													.	.	.	.	.	.	T	T	T									S		T	T	S	S	T	T												G	G	G										T	T	T	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M	F	V	A	T	S	N	S	M	N
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	A	R	T	K	.	.	.	.	.	.	.	.	P	I	G	G	A	S	F	K	I	I	F	L	D	E	A	D	A	L	.	.	.	.	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	V	R	F	I	L	S	C	N	Y	S	S
Template Known Secondary structure				T	T	S		.	.	.	.	.	.	.	.		S	S	S		S								T	G	G	G	S	.	.	.	.															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								S		G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																.	140	.	.	.	.	.	.	.	.	.	150	.
			477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	P	A	P	L	L	D	R	M	E	V	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A	G	V	R	G	L	E	R	E	I	S	K	L	C	R
Query Conservation		.
Alig confidence		.																																	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	.	.	.	.	.	.	.	.	.	.	E	G	L	E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	E	.	.	G	D	M	R	R	A	I	N	I	L	Q	A	A	A	A
Template Known Secondary structure		G	S						T	T																									.	.	.	.	.	.	.	.	.	.		T																T	.	.	T														T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions