Job Description P0A9M0 Confidence 99.33% Date Thu Jan 5 11:10:41 GMT 2012 Rank 94 Aligned Residues 236 % Identity 17% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																						.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	.	.	.	.	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.																		.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	F	I	Y	R	N	F	T	A	I	I	G	E	I	A	R
Template Known Secondary structure		S			T	T																		S		B	S	S										T	T	S	S													T	T	S										T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
					391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	R	G	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D	V	M
Query Conservation		.	.	.
Alig confidence		.	.	.																																							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	.	.	.	.	A	P	D	I	L	S	T	F	I	R	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	E	A	D	K	L	G	A	F	R	I	A
Template Known Secondary structure				T					S	S																		T	T									T	G	G	G	S	.	.	.	.												T	T	.	.	.	.	.	.	.	.	.	.	.						S	S	B
Template Predicted Secondary structure																																											.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.												150	.	.	.	.	.	.	.	.	.	160
		468	.	470	.	.	.	.	.	.					.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure											.	.	.	.										.	.
Query SS confidence											.	.	.	.										.	.
Query Sequence		F	V	A	T	S	N	S	M	N	.	.	.	.	I	P	A	P	L	L	D	R	M	.	.	E	V	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A	G	V
Query Conservation											.	.	.	.										.	.
Alig confidence											.	.	.	.										.	.																								.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		L	V	I	V	G	H	N	D	A	V	L	N	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	.	.	.	.	.	.	.	.	G	L	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	D	I	T	G	A	Q	T	P	L
Template Known Secondary structure							S	S	T					T	S									T	T									B															.	.	.	.	.	.	.	.		B		T	T	S	S													S	B	S	S	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	L	E	R	E	I	S	K	L	C	R	K	A	V	K	Q	L	L	L	D	K	S	L	K	H	I	E	I	N	G	D	N	L	H	D	Y	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	N	R	G	D	A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K
Template Known Secondary structure			T	T																					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions