|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | L | H | L | T | R | N | G | S | I | L | E | I | T | L | D | R | P | . |
K | A | N | A | I | D | A | K | T | S | F | E | M | G | E | V | F | L | N | F | R | D | D | P | Q | L | R | V | A | I | I | T | G | A | G | E | K | F | F | S | A | G | W | D | L | K | A | A | A | E | G | E | A | P | D | A | D | F | G | P |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
| . |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |
|   |
| . |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
Template Sequence |   |
D | L | V | Q | V | E | R | N | G | P | V | T | T | V | I | I | N | R | P | Q | A | R | N | A | V | N | G | P | T | A | A | A | L | Y | S | A | F | A | E | F | D | R | D | E | S | A | S | V | A | V | L | C | G | N | G | . |
G | T | F | C | A | G | A | D | L | K | A | F | G | T | A | E | A | N | A | V | . |
H | R | T |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| G | G | G | T | T |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  | S | T | . | T |
|
| B |
|
| B |
| G | G | G | T | T | S | T | T |
|
|
|
| . |
| S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . | 80 |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | F | A | G | L | T | E | I | F | N | L | D | K | P | V | I | A | A | V | N | G | Y | A | F | G | G | G | F | E | L | A | L | A | A | D | F | I | V | C | A | D | N | A | S | F | A | L | P | E | A | K | L | G | I | V | P | D | S | G | G | V | L | R | L | P | K | I | L | P | P | A | I | V | N | E | M | V | M | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |
|   |
|   |
|
|
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |
|   |
|   |
|
|
|   |   |
|   |
|
|   |
|   |   |
|
|   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
Template Sequence |   |
G | P | G | P | M | G | P | S | R | M | M | L | S | K | P | V | I | A | A | V | S | G | Y | A | V | A | G | G | L | E | L | A | L | W | C | D | L | R | V | A | E | Q | D | A | V | F | G | V | F | C | R | R | W | G | V | P | L | I | D | G | G | T | V | R | L | P | R | L | I | G | H | S | R | A | M | D | M | I | L | T |
Template Known Secondary structure |   |
S | S | B | T | T | B | S | T | T |
|
|
| S | S |
|  |  |  |  |  |
| S |  |  |  | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  | T | T |
|  |  |  |
| T |  |  |  |  | T |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | R | M | G | A | E | E | A | L | R | W | G | I | V | N | R | V | V | S | Q | A | E | L | M | D | N | A | R | E | L | A | Q | Q | L | V | N | S | A | P | L | A | I | A | A | L | K | E | I | Y | R | T | T | S | E | M | P | V | E | E | A | Y | R | Y | I | R | S | G | V | L | K | H | Y | P | S | V | L | H |
Query Conservation |   |
|   |   |   |   |
|   |
|
|   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|
|   |   |   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
Template Sequence |   |
G | R | A | V | Q | A | D | E | A | L | A | I | G | L | A | N | R | V | V | P | N | G | Q | A | R | Q | A | A | E | E | L | A | A | Q | L | A | A | L | P | Q | Q | C | L | R | S | D | R | L | S | A | L | Q | Q | W | G | L | P | E | S | A | A | L | D | L | E | F | A | S | I | S | R | V | A | A | E | A | L | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |