Job Description P31551 Confidence 99.16% Date Thu Jan 5 11:48:12 GMT 2012 Rank 81 Aligned Residues 147 % Identity 19% Template c3kthD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Resolution 3.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	T	L	D	R	P	K	A	N	A	I	D	A	K	T	S	F	E	M	G	E	V	F	L	N	F	R	D	D	P	Q	L	R	V	A	I	I	T	G	A	G	E	K	F	F	S	A	G	W	D	L	K	A	A	A	E	G	E	A	P	D	A	D	F	G	P	G	G	F	A	G	L	T	E	I	F	N	L	D
Query Conservation
Alig confidence									.	.	.	.																																	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																																	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	M	L	G	S	A	.	.	.	.	I	D	D	N	V	A	N	S	I	V	S	Q	L	L	F	L	A	A	E	D	P	E	K	E	I	S	L	Y	I	N	S	P	.	.	.	.	.	G	G	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	M	A	I	Y	D	T	M	Q	F	I	K
Template Known Secondary structure							S		.	.	.	.	B																				S	S	S										.	.	.	.	.		B				.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S
Template Predicted Secondary structure									.	.	.	.																																	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.															.	.	.	.	.	.	.	.	80	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	V	I	A	A	V	N	G	Y	A	F	G	G	G	F	E	L	A	L	A	A	D	.	.	F	I	V	C	A	D	N	A	S	F	A	L	P	E	A	K	L	G	I	V	P	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	L	R	L	P	K	I	L	P	P	A	I	V
Query Conservation																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	V	S	T	I	C	I	G	M	A	A	S	M	G	A	F	L	L	A	A	G	E	K	G	K	R	Y	A	L	P	N	S	E	V	M	I	H	Q	P	L	G	G	A	Q	G	Q	A	T	E	I	E	I	A	A	K	R	I	L	L	L	R	D	K	L	N	K	V	L	A	E	R	T	G	Q	P	L	E	V	I
Template Known Secondary structure		S												T									S		T	T						T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	M	V	M	T	G	R	R	M	G	A	E	E	A	L	R	W	G	I	V	N	R	V	V	S	Q	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	D	T	D	R	D	N	F	K	S	A	E	E	A	L	E	Y	G	L	I	D	K	I	L	T	H	L	E
Template Known Secondary structure					T	S	S													T	S		S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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