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Job DescriptionP31551
Confidence98.21%DateThu Jan 5 11:48:12 GMT 2012
Rank111Aligned Residues165
% Identity14%Templatec3glmD_
PDB info PDB header:lyaseChain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20. ........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  ILEITLDRP. KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIF
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Template Sequence  VYIVASDNKKMAGAWVPGQAENLIRCSDAAKMM. HLPLIYLLNCS. . . . . . GVEFPNQDKVYPNRRGGGTPFFRN. SELN
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TTTGGG
B
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GGGSSSTTSTT.
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   108.110.........120.........130.........140 .........150. ........160.........170..... ....
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  NLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEAL
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Template Sequence  QLGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANM. . . . . . . AVGGAGAEQIIAAQIENSK. . . . . . LKVPAPGSVPIH
Template Known Secondary structure  TT


STSSSTT
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TTT......T



TTB
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   180.........190.........200.........210..... ....220.........230.... .....240......
 
   172.......180.........190.........200.
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Query Sequence  . . RWGIVNRVVSQAELMDNARELAQQLVNSAP
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Template Sequence  YDETGFFREVYQNDL. . . GVIDGIKKYISYLP
Template Known Secondary structure  TTTS

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   262.......270...... ...280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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