Job Description P31551 Confidence 97.44% Date Thu Jan 5 11:48:12 GMT 2012 Rank 117 Aligned Residues 167 % Identity 17% Template c3ff6D_ PDB info PDB header:ligase Chain: D: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: human acc2 ct domain with cp-640186 Resolution 3.19 Å

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		10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																												60
Predicted Secondary structure														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	S	I	L	E	I	T	L	D	R	P	.	.	K	A	N	A	I	D	A	K	T	S	F	E	M	G	E	V	F	L	N	F	R	D	D	P	Q	L	R	V	A	I	I	T	G	A	G	E	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F
Query Conservation														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	R	D	V	I	V	I	G	N	D	I	T	F	R	I	G	S	F	G	P	G	E	D	L	L	Y	L	R	A	S	E	M	A	R	A	E	G	I	P	K	I	Y	V	A	A	N	S	G	A	R	I	G	M	A	E	E	I	K	H	M	F	H	V	A	W	V	D	P	E	D	P	H	K	G	F	K	Y	L	Y
Template Known Secondary structure		T											T	T	S	G	G	G		B																			T											S	B										T	T						S		T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		1784	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.																										.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		S	A	G	W	D	L	K	A	A	A	E	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	D	A	D	F	G	P	G	G	F	A	G	L	.	.	T	E	I	F	N	L	D	K	P	V	I	A	A	V	N	G	Y	A	F	G	G	G	F	E	L	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		L	T	P	Q	D	Y	T	R	I	S	S	L	N	S	V	H	C	K	H	I	E	E	G	G	E	S	R	Y	M	I	T	D	I	I	G	K	D	D	G	L	G	V	E	N	L	R	G	S	G	M	I	A	G	E	S	S	L	A	Y	E	E	I	V	T	I	S	L	V	T	C	R	A	I	G	I	G	A	Y	L	V
Template Known Secondary structure												T	T											T	T												S	S	S		S	S																					S								S				T
Template Predicted Secondary structure
Template SS confidence
		1864	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																						.	.		.	.	.	.	.	.
Query SS confidence																																																						.	.		.	.	.	.	.	.
Query Sequence		L	A	A	D	F	I	V	C	A	D	N	A	S	F	A	L	P	E	A	K	L	G	I	V	P	D	S	G	G	V	L	R	L	P	K	I	L	P	P	A	I	V	N	E	M	V	M	T	G	R	R	M	.	.	G	.	.	.	.	.	.	A	E	E	A	L	R	W	G	I	V	N	R	V	V	S	Q	A	E	L
Query Conservation																																																						.	.		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.							.	.		.	.	.	.	.	.																			.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																																		.
Template Sequence		R	L	G	Q	R	V	I	Q	V	E	N	S	H	I	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	A	S	A	L	N	K	.	.	V	L	G	R	E	V	Y	T	S	N	N	Q	L	G	G	V	Q	I	M	H	Y	N	G	V	S	H	I	T	V	P	D	D	F	.
Template Known Secondary structure				T							T	T		B			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								.	.			S	S				S		S					B					T	T	T	T	S	S	S				S	S			.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																																		.
Template SS confidence
		1944	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.																					1960	.	.	.	.	.	.	.			.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	N	A	R	E	L	A	Q	Q	L	V	N	S	A	P
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	E	G	V	Y	T	I	L	E	W	L	S	Y	M	P
Template Known Secondary structure		.	.											T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				2001	.	.	.	.	.	.	.	.	2010	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions