Job Description P31551 Confidence 98.39% Date Thu Jan 5 11:48:12 GMT 2012 Rank 106 Aligned Residues 176 % Identity 13% Template c1vrgE_ PDB info PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		T	R	N	G	S	I	L	E	I	T	L	D	R	P	K	A	N	.	.	A	I	D	A	K	T	S	F	E	M	G	E	V	F	L	N	F	R	D	D	P	Q	L	R	V	A	I	I	T	G	A	G	E	K	F	F	S	A	G	W	D	L	K	A	A	A	E	G	E	A	P	D	A	D	F	G	P	G	G	F	A
Query Conservation																			.	.
Alig confidence																			.	.																					.													.	.					.	.	.	.	.	.	.	.
Template Conservation																																									.													.	.					.	.	.	.	.	.	.	.
Template Sequence		R	I	Q	G	K	T	V	G	I	V	A	N	Q	P	S	V	L	A	G	V	L	D	I	D	S	S	D	K	A	A	R	F	I	R	F	L	D	A	F	.	N	I	P	I	L	T	F	V	D	T	P	G	.	.	Y	L	P	G	.	.	.	.	.	.	.	.	V	A	Q	E	H	G	G	I	I	R	H	G	A	K
Template Known Secondary structure				T	T										T	T	S	G	G	G		B																		T	.	T												.	.	B				.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																									.													.	.					.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.									.	370	.	.	.	.	.	.	.	.	.	380	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.
Predicted Secondary structure																																.	.	.	.																																				.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.																																				.	.	.	.	.	.	.
Query Sequence		G	L	T	E	I	F	N	L	D	K	P	V	I	A	A	V	N	G	Y	A	F	G	G	G	F	E	L	A	L	A	.	.	.	.	A	D	F	I	V	C	A	D	N	A	S	F	A	L	P	E	A	K	L	G	I	V	P	D	S	G	G	V	L	R	L	P	K	I	L	.	.	.	.	.	.	.	P	P	A	I
Query Conservation																																.	.	.	.																																				.	.	.	.	.	.	.
Alig confidence																																.	.	.	.															.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		L	L	Y	A	Y	S	E	A	T	V	P	K	I	T	V	I	L	R	K	A	Y	G	G	A	Y	I	A	X	G	S	K	H	L	G	A	D	X	V	L	A	W	P	S	A	E	I	A	V	.	.	.	.	.	.	X	G	P	E	G	A	A	N	I	I	F	K	R	E	I	E	A	S	S	N	P	E	E	T	R	R
Template Known Secondary structure											S																		T	T		G	G	G	T		S						T	T					S	.	.	.	.	.	.	S										T						S	S	S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430							.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	E	M	V	M	T	G	R	R	M	G	A	E	E	A	L	R	W	G	I	V	N	R	V	V	S	Q	A	E	L	M	D	N	A	R	E	L	A	Q	Q	L	V	N	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	I	E	E	Y	K	Q	Q	F	A	N	P	Y	I	A	A	S	R	G	Y	V	D	X	V	I	D	P	R	E	T	R	K	Y	I	X	R	A	L	E	V	C	E	T	K	V
Template Known Secondary structure												S	S							T	T	S	S	S					G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions