Job Description Q47140 Confidence 43.36% Date Wed Jan 25 15:21:13 GMT 2012 Rank 89 Aligned Residues 125 % Identity 14% Template c3g0kA_ PDB info PDB header:ca-binding protein Chain: A: PDB Molecule:putative membrane protein; PDBTitle: crystal structure of a protein of unknown function with a cystatin-2 like fold (saro_2880) from novosphingobium aromaticivorans dsm at3 1.30 a resolution Resolution 1.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	L	H	H	R	I	S	Q	F	L	F	H	E	A	S	L	L	D	D	W	K	F	R	D	W	L	A	Q	L	D	E	E	I	R	Y	T	M	R	T	T	V	N	A	Q	T	R	D	R	R	K	G	V	Q	P	P	T	T	W	I	F	N	D	T	K	D	Q	L	E	R	R	I	A	R	L	E	T	G	M
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		T	A	E	E	Q	A	N	H	D	L	V	I	E	X	Y	N	K	V	L	I	A	X	D	S	S	A	V	D	R	Y	I	A	P	G	Y	V	Q	H	S	S	L	A	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	A	L	K	G	F	L	D	R	V	R	A	E	.
Template Known Secondary structure																			T	T	T	T	T		G	G	G	G	G	G	T										S	S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		A	W	A	E	E	P	P	S	R	T	R	H	L	I	S	N	C	Q	I	S	E	T	D	I	P	N	V	F	A	V	R	V	N	Y	L	L	Y	R	A	Q	K	E	R	D	E	T	F	Y	V	G	T	R	F	D	K	V	R	R	L	E	D	D	N	W	R	L	L	E	.	R	D	I	V	L	D	Q	A	V	I	T
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.															.	.	.	.								.	.	.																.	.	.	.	.									.	.					.
Template Conservation		.	.	.	.	.	.															.	.	.	.								.	.	.																.	.	.	.	.									.	.
Template Sequence		.	.	.	.	.	.	S	P	D	A	R	Q	T	I	H	R	S	F	V	D	.	.	.	.	G	D	H	V	I	T	H	.	.	.	T	H	V	E	R	W	P	G	D	A	G	L	A	V	V	.	.	.	.	.	D	I	F	R	V	E	G	G	.	.	X	I	V	E	H	W	D	V	I	Q	D	V	P	A	N	P
Template Known Secondary structure		.	.	.	.	.	.			S												.	.	.	.	T	T						.	.	.						S	T	T								.	.	.	.	.							T	T	.	.														S	S
Template Predicted Secondary structure		.	.	.	.	.	.															.	.	.	.								.	.	.																.	.	.	.	.									.	.
Template SS confidence
								63	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		165	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	N	L	S	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	P	N	S	X	F
Template Known Secondary structure		S		S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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