Job Description Q47140 Confidence 98.29% Date Wed Jan 25 15:21:13 GMT 2012 Rank 41 Aligned Residues 114 % Identity 13% Template c3fsdA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ntf2-like protein of unknown function in nutrient uptake; PDBTitle: crystal structure of ntf2-like protein of unknown function in nutrient2 uptake (yp_427473.1) from rhodospirillum rubrum atcc 11170 at 1.70 a3 resolution Resolution 1.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	S	Q	F	L	F	H	E	A	S	L	L	D	D	W	K	F	R	D	W	L	A	Q	L	D	E	E	I	R	Y	T	M	R	T	T	V	N	A	Q	T	R	D	R	R	K	G	V	Q	P	P	T	T	W	I	F	N	D	T	K	D	Q	L	E	R	R	I	A	R	L	E	T	G	M	A	W	A	E	E	P
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	A	F	Y	E	E	R	L	R	A	A	X	L	T	G	D	L	K	G	L	E	T	L	L	A	D	D	L	A	F	V	D	H	T	G	C	V	K	T	K	Q	T	H	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	R	A	G	L
Template Known Secondary structure																	T																		T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																													60	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		P	S	R	T	R	H	L	I	S	N	C	Q	I	S	E	T	D	I	P	N	V	F	A	V	R	V	N	Y	L	L	Y	R	A	Q	K	E	R	D	E	T	F	Y	V	G	T	R	F	D	K	V	R	R	L	E	D	D	.	.	N	W	R	L	L	E	R	D	I
Query Conservation																																																										.	.
Alig confidence																			.																						.	.																.	.
Template Conservation																			.																						.	.
Template Sequence		L	K	L	S	R	L	D	L	S	D	A	V	V	R	A	A	G	.	E	D	G	R	V	V	V	V	R	A	V	T	A	G	V	Y	D	G	E	A	F	.	.	T	E	T	L	R	F	T	R	I	W	R	R	T	Q	G	P	A	G	W	K	L	V	A	G	H	C
Template Known Secondary structure																	S	S	.	T	T															T	T				.	.														T	T	T	T
Template Predicted Secondary structure																			.																						.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions