Job Description Q47140 Confidence 95.62% Date Wed Jan 25 15:21:13 GMT 2012 Rank 77 Aligned Residues 103 % Identity 9% Template c3f40A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized ntf2-like protein; PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_677363.1) from cytophaga hutchinsonii atcc 33406 at3 1.27 a resolution Resolution 1.27 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	F	L	F	H	E	A	S	L	L	D	D	W	K	F	R	D	W	L	A	Q	L	D	E	E	I	R	Y	T	M	R	T	T	V	N	A	Q	T	R	D	R	R	K	G	V	Q	P	P	T	T	W	I	F	N	D	T	K	D	Q	L	E	R	R	I	A	R	L	E	T	G	M	A	W	A	E	E	P	P	S
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	L	V	L	E	F	I	H	A	L	N	T	E	N	F	P	A	A	K	K	R	L	N	E	N	F	T	F	N	G	P	X	G	H	R	E	G	S	E	R	Y	X	N	D	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T								T										T	T					S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	R	H	L	I	S	N	C	Q	I	S	E	T	D	I	P	N	V	F	A	V	R	V	N	Y	L	L	Y	R	A	Q	K	E	R	D	E	T	F	Y	V	G	T	R	F	D	K	V	R	R	L	E	D	D	N	W	R	L	L	E	R	D	I	V	L	D	Q	A	V	I
Query Conservation
Alig confidence		.																										.	.	.	.	.	.													.	.	.	.							.	.
Template Conservation		.																										.	.	.	.	.	.													.	.	.	.							.	.
Template Sequence		.	E	K	X	K	F	K	Y	V	V	H	K	X	F	E	E	G	N	D	V	C	L	I	Y	D	I	.	.	.	.	.	.	N	X	N	G	K	T	I	A	A	S	G	L	.	.	.	.	Y	H	L	E	K	G	.	.	E	I	T	S	L	H	V	Y	F	D	P	R	P	L
Template Known Secondary structure		.																T	T									.	.	.	.	.	.			T	T									.	.	.	.					T	T	.	.												G	G	G
Template Predicted Secondary structure		.																										.	.	.	.	.	.													.	.	.	.							.	.
Template SS confidence
			54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions