Job Description P76143 Confidence 96.06% Date Thu Jan 5 12:19:36 GMT 2012 Rank 214 Aligned Residues 149 % Identity 13% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																				.																															.	.	.	.	.
Query SS confidence																				.																															.	.	.	.	.
Query Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	.	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	.	.	.	.	.	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q
Query Conservation																				.																															.	.	.	.	.
Alig confidence																				.		.	.	.	.	.	.	.																							.	.	.	.	.														.	.
Template Conservation																						.	.	.	.	.	.	.																																									.	.
Template Sequence		A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	.	.	.	.	.	.	.	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	.	.	L	A	K	A	A	R	M	I	G	V	D
Template Known Secondary structure									T													.	.	.	.	.	.	.															T								T	T	T					S		T	T	S	S						.	.									T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.																																									.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure										.	.	.	.	.	.	.														.	.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.														.	.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	.	.	.	.	.	.	.	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H	.	.	.	.	.
Query Conservation										.	.	.	.	.	.	.														.	.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.														.	.	.	.	.	.	.								.														.	.																		.	.	.	.	.
Template Conservation																																												.														.	.
Template Sequence		Q	I	H	T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	.	L	H	P	G	L	M	P	E	L	I	R	L	F	.	.	G	K	D	L	V	I	Q	A	G	G	G	V	M	G	H	P	D	G	P	R	A	G
Template Known Secondary structure										S	S	S																S			T	T										S	S	.			G	G	G									.	.		S												T		T	T
Template Predicted Secondary structure																																												.														.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	A	M	M	K	A	V	Q	A	V	V	H	H	N	E	T	A	D	R	A	Y	E	L	Y	L	S
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		A	K	A	L	R	D	A	I	D	A	A	I	.	E	G	V	D	L	D	E	K	A	K	S	S	P	E
Template Known Secondary structure														.		T							T	T	S
Template Predicted Secondary structure														.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions