Job Description P76143 Confidence 92.86% Date Thu Jan 5 12:19:36 GMT 2012 Rank 285 Aligned Residues 144 % Identity 17% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	.	.	.	.	.	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I	I
Query Conservation																																																	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																							.	.	.	.	.														.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	.	.	.	.	.	.	.	.	.	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	.	.	M	T	K	L	Q	R	L	A	G	L	D	A	V
Template Known Secondary structure								T										.	.	.	.	.	.	.	.	.															S	S							T	T	T						S	T	T	S	S						.	.									T		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.
Predicted Secondary structure								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																								.			.	.																.
Query SS confidence								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																								.			.	.																.
Query Sequence		K	T	Y	Y	V	E	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	.	.	.	.	.	.	.	.	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	.	Q	G	.	.	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H	.	P	V
Query Conservation								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																								.			.	.																.
Alig confidence								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.												.	.	.	.	.	.							.			.	.																.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		I	M	P	G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	.	.	.	.	.	.	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	K
Template Known Secondary structure						S	S	T	T	S	S	S														S			T	T											S	B		T	T	T	.	.	.	.	.	.										S	S		S				B	S	S	S	S	S	S		T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		264	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		A	M	M	K	A	V	Q	A	V	V	H	.	.	.	H	N	E	T	A	D	R	A	Y	E	L	Y	L	S
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		A	G	A	K	S	I	R	Q	A	W	E	A	I	E	Q	G	I	S	I	E	T	W	A	E	T	H	P	E
Template Known Secondary structure																T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions