Job Description P76143 Confidence 97.13% Date Thu Jan 5 12:19:36 GMT 2012 Rank 177 Aligned Residues 207 % Identity 15% Template d1vhna_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.59

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.								.	.	.	.	.	.
Query SS confidence																												.	.	.	.								.	.	.	.	.	.
Query Sequence		Y	F	Q	G	P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	H	A	D	V	L	.	.	.	.	M	C	T	R	G	I	L	.	.	.	.	.	.	R	S	V	V	P	P	A	T	N	R	P	V	V	L	R	A	S	G	A	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D
Query Conservation																												.	.	.	.								.	.	.	.	.	.
Alig confidence																												.	.	.	.								.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		V	G	L	A	P	X	A	G	Y	T	D	S	A	F	R	T	L	A	F	E	W	G	A	D	F	A	F	S	E	X	V	S	A	K	G	F	L	X	N	S	Q	K	T	E	E	L	L	P	Q	P	H	E	R	N	V	A	V	Q	I	F	G	S	E	P	N	E	L	.	.	.	.	.	.	.	.	S	E	A	A	R
Template Known Secondary structure								T	T	T		S									T	T	T							S									T	T								S			T	T		T	T								S						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.											.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	.	.	.	.	.	.	.	.	.	.	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		I	L	S	E	K	Y	K	W	I	D	L	N	A	G	C	P	V	R	K	V	V	K	E	G	A	G	G	A	L	L	K	D	L	R	H	F	R	Y	I	V	R	E	L	R	K	S	V	S	G	K	F	S	V	K	T	R	L	G	W	E	K	N	E	.	.	.	.	V	E	E	I	Y	R	I	L	V	E	E	G	V
Template Known Secondary structure				T	T	T		S																T	T		G	G	G	G	G	S																	S	S								S		S	S	S			.	.	.	.											T	T
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.
		200	.	.	.	.								.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.					.	.	.	.																																					.
Query SS confidence							.	.	.	.	.	.	.					.	.	.	.																																					.
Query Sequence		Q	I	I	K	T	.	.	.	.	.	.	.	Y	Y	V	E	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	.	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H	P	V	A	M	M	K
Query Conservation							.	.	.	.	.	.	.					.	.	.	.																																					.
Alig confidence							.	.	.	.	.	.	.					.	.	.	.									.	.																.	.	.	.	.							.																		.	.	.
Template Conservation																														.	.																.	.	.	.	.																									.	.	.
Template Sequence		D	E	V	F	I	H	T	R	T	V	V	Q	S	F	T	G	R	A	E	W	K	A	L	S	V	L	E	K	.	.	R	I	P	T	F	V	S	G	D	I	F	T	P	E	D	.	.	.	.	.	A	K	R	A	L	E	E	S	G	C	D	G	L	L	V	A	R	G	A	I	G	R	P	W	.	.	.	I	F	K
Template Known Secondary structure								S	S		T	T	T	T	T	S	S				G	G	G	G	G	G	S			.	.	S	S						S	S			S				.	.	.	.	.											S					S	G	G	G	T	T		T	T	.	.	.
Template Predicted Secondary structure																														.	.																.	.	.	.	.																									.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.
		268	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		A	V	Q	A	V	V	H	H	N	.	.	.	.	E	T	A	D	R	A	Y	E	L	Y	L	S
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		Q	I	K	D	F	L	R	S	G	K	Y	S	E	P	S	R	E	E	I	L	R	T	F	E	R
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions