|   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | R | I | D | I | N | I | A | P | L | F | E | . |
H | A | D | V | L | M | C | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | G | I | L | R | S | V | V | P | P | A | T | N | R | P | V | V | L | R | A | S | G | A | N | S | I | L | A | E | L | S | N | E | A | V | A | L | S | M | D | D | A | V | R | L |
Query Conservation |   |
|
|   |   |   |   |   |
|   |   |
|   |   | . |
|   |
|
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   | . |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |
|
Template Sequence |   |
F | S | R | L | G | E | E | I | K | A | V | D | E | A | G | A | D | W | I | H | V | D | V | M | D | G | R | F | V | P | N | I | T | I | G | P | L | I | V | D | A | I | R | P | . |
L | T | K | K | T | L | D | V | H | L | M | I | V | E | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | Y | V | E | D | F | A | K | A |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  | B | S | S | S | S | S |
| B |
|
|
|  |  |  |  |  |  |  | G | G | . | G |
|
| S |  |  |  |  |  |  |  | S | S | S | G | G | . | . | . | . | . | . | . | . | . | . | G | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |
|
|  |  |  |  |
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 80 | . | . | . | . |
  |
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
N | S | C | A | V | A | A | Q | V | Y | I | G | S | E | Y | E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | G | K | D | M | V | R | D | Q | R | Y | F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I | K | T | Y | Y | V | E | . |
. |
. |
. |
. |
Query Conservation |   |
|
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | A | D | I | I | S | V | H | V | E | H | N | A | S | P | H | . |
. |
. |
. |
. |
. |
L | H | R | T | L | C | Q | I | R | E | L | G | K | K | A | G | A | V | L | N | P | S | T | P | L | D | F | L | E | Y | V | L | . |
. |
. |
. |
. |
. |
. |
P | V | C | D | L | I | L | I | M | S | V | N | P | Q | S | F | I | P | E |
Template Known Secondary structure |   |
T |
| S |  |  |  |  |  |
| S | T | T | T |
| T | T | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T |
|
| G | G | G | G | T | T | T | G | . | . | . | . | . | . | . | G | G |
| S |  |  |  |  |  | S | S |
|
|
|
|
|
| G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
|
|
|
|
|
|
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
K | G | F | E | R | I | V | A | G | C | P | V | P | I | V | I | A | G | G | K | K | L | P | E | R | E | A | L | E | M | C | W | Q | A | I | D | Q | G | A | S | G | V | D | M | G | R | N | I | F | Q | S | D | H | P | V | A | M | M | K | A | V | Q | A |
Query Conservation |   |
. | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|
|   |   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   | . | . | . | . | . |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
V | L | P | K | I | R | A | L | R | Q | M | C | D | E | R | G | L | D | P | W | I | E | V | D | G | G | L | K | P | N | N | . |
. |
. |
. |
. |
T | W | Q | V | L | E | A | G | A | N | A | I | V | A | G | S | A | V | F | N | A | P | N | Y | A | E | A | I | A | G | V | R | N |
Template Known Secondary structure |   |
G |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  | S | S |
|
| T | T | T | . | . | . | . | . | T |  |  |  |  |  |  | T |
|
|  |  |  |  | S |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |