Return to main results Retrieve Phyre Job Id

Job DescriptionP76143
Confidence97.77%DateThu Jan 5 12:19:36 GMT 2012
Rank126Aligned Residues107
% Identity17%Templated1tb3a1
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200.... .....210........ .220..
Predicted Secondary structure 













...........




..


Query SS confidence 
















































. . . . . . . . . . .













. .



Query Sequence  IIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKT. . . . . . . . . . . YYVEKGFERIVAGC. . PVPI
Query Conservation 
  
 
     




      
    
   

  



 







 ...........    
    

   ..  

Alig confidence 
























..........













...........













..



Template Conservation     
  
      






    
..........
  
   


 
 





            
  
   
   


Template Sequence  WNDLSLLQSITRLPIILKGILTKED. . . . . . . . . . AELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEV
Template Known Secondary structure  TT

S

S..........TT
S

GGGTSS
SS

TTSS
Template Predicted Secondary structure 







..........





















Template SS confidence 















































































   206...210.........220.........230 .........240.........250.........260.........270.....
 
   223......230.........240.........250.........260.........270...... ...280.........
Predicted Secondary structure 

















.


Query SS confidence 





















































.












Query Sequence  VIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHN. ETADRAYELYLSE
Query Conservation 

 

    
   
     

 


 







 

 

     

  



 . 
  

       
Alig confidence 










.....

















............







.












Template Conservation 
 




 
 
.....
 







 
 


  ............
  
   
  

   
  
  
Template Sequence  YMDGGVRTGTD. . . . . VLKALALGARCIFLGRPI. . . . . . . . . . . . LWGLACKGEDGVKEVLDILTAE
Template Known Secondary structure  SS

S.....TT
S
S............
Template Predicted Secondary structure 




.....



............


Template SS confidence 



































































   276...280...... ...290.........300.... .....310.........320......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions