 |
Job Description | P76143 | Confidence | 97.77% | Date | Thu Jan 5 12:19:36 GMT 2012 |
Rank | 126 | Aligned Residues | 107 |
% Identity | 17% | Template | d1tb3a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.30 |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
. | 220 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | G | K | D | M | V | R | D | Q | R | Y | F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I | K | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | Y | V | E | K | G | F | E | R | I | V | A | G | C | . |
. |
P | V | P | I |
Query Conservation |   |
|   |   |
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |
|
|   |   |   | . | . |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|
Template Sequence |   |
W | N | D | L | S | L | L | Q | S | I | T | R | L | P | I | I | L | K | G | I | L | T | K | E | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | L | A | M | K | H | N | V | Q | G | I | V | V | S | N | H | G | G | R | Q | L | D | E | V | S | A | S | I | D | A | L | R | E | V | V | A | A | V | K | G | K | I | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  |  |
| S |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| G | G | G | T | S | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
  |
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
. | . | . | 280 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | A | G | G | K | K | L | P | E | R | E | A | L | E | M | C | W | Q | A | I | D | Q | G | A | S | G | V | D | M | G | R | N | I | F | Q | S | D | H | P | V | A | M | M | K | A | V | Q | A | V | V | H | H | N | . |
E | T | A | D | R | A | Y | E | L | Y | L | S | E |
Query Conservation |   |
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|
|   |   |
|
|
|
|   | . |   |
|   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|   |
| . | . | . | . | . |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|
Template Sequence |   |
Y | M | D | G | G | V | R | T | G | T | D | . |
. |
. |
. |
. |
V | L | K | A | L | A | L | G | A | R | C | I | F | L | G | R | P | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | W | G | L | A | C | K | G | E | D | G | V | K | E | V | L | D | I | L | T | A | E |
Template Known Secondary structure |   |
 |  |  | S | S |
|
| S |  |  |  | . | . | . | . | . |  |  |  |  |  |  | T | T |
| S |
|  |  |  | S |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|