|   |
50 | . | . | . | . | . | . | . | |
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|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | |
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. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
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|
|  |  |  |  | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
|
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|
Query SS confidence |   |
|
|
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|
| . |
. |
. |
. |
. |
. |
. |
|
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| . |
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| . |
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. |
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Query Sequence |   |
K | T | V | M | L | A | F | D | . |
. |
. |
. |
. |
. |
. |
H | G | Y | F | Q | G | P | T | T | G | L | E | R | I | D | I | N | I | A | P | L | F | E | . |
H | A | D | V | L | M | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | R | G | I | L | R | S | V | V | P | P | A | T | N | R | P | V | V | L | R | A | S | G | A | N |
Query Conservation |   |
|   |
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| . | . | . | . | . | . | . |
|
|   |   |   |
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|   |   |
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|   |   |
|   |   | . |
|   |
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|   |
| . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |
|   |   |   |
|
Alig confidence |   |
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| . | . | . | . | . | . | . |
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| . |
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Template Conservation |   |
  |   |
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|   |
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|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
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|   |   |   |   |
|
|
Template Sequence |   |
K | R | I | V | P | C | L | D | V | H | A | G | R | V | V | K | G | V | N | F | V | N | L | R | D | A | G | D | P | V | E | A | A | R | A | Y | D | E | A | G | A | D | E | L | V | F | L | D | I | S | A | T | H | E | E | R | A | I | L | L | D | V | V | A | R | V | A | E | R | V | F | I | P | L | T | V | G | G | G | V |
Template Known Secondary structure |   |
B |  |  |  |  |  |  |  |  |  | T | T |  |  | T | T |
|
|
| S | S |
|
| S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  |
|
| S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  | S | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
|
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |
|
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|  |  | . | . | . | . | . | . | . |
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
S | I | L | A | E | L | S | N | E | A | V | A | L | S | M | D | D | A | V | R | L | N | S | C | A | V | A | A | Q | V | Y | I | G | S | E | Y | E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | G | K | D | M | V | R | D | Q | R | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |   |
|   |   |
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|   |
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|   |
|
|   |   |   |
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|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|
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|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   | . | . | . | . | . | . | . |
Alig confidence |   |
| . | . | . | . | . | . | . | . | . |
|
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| . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . |
Template Conservation |   |
  | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
R | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | E | D | A | R | K | L | L | L | S | G | A | D | K | V | S | V | N | . |
. |
. |
. |
. |
. |
. |
. |
S | A | A | V | R | R | P | E | L | I | R | E | L | A | D | H | F | G | A | Q | A | V | V | L | A | I | D | A | R | W | R | G | D | F | P | E | V | H | V | A | G | G | R |
Template Known Secondary structure |   |
| . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| . | . | . | . | . | . | . | . |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
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|
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  |   |
85 | |
|
|
|
|
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
|
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|
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
  |   |
|
|
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|
|
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
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|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
|
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| . |
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. |
. |
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. |
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Query Sequence |   |
. |
. |
. |
. |
. |
Y | F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I | K | T | Y | Y | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | G | F | E | R | I | V | A | G | C | P | V | P | I | V | I | A | G | G | K | K | L | P | E | R | E | A | L | E | M | C | W | Q | A | I | D | Q | G | A | S | G | V |
Query Conservation |   |
. | . | . | . | . |   |
|
|   |   |
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|   |
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|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   |   |   |
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|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
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|   |
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|   |
|
|
Alig confidence |   |
. | . | . | . | . |
|
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| . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   |   |
| . | . | . | . | . |
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
V | P | T | G | L | H | A | V | E | W | A | V | K | G | V | E | L | G | A | G | E | I | L | L | T | S | M | D | R | D | G | T | K | E | G | Y | D | L | R | L | T | R | M | V | A | E | A | V | G | V | P | V | I | A | S | G | G | A | G | R | M | E | H | . |
. |
. |
. |
. |
F | L | E | A | F | Q | A | G | A | E | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  | T | T | T | T | T | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  | S |
|
|
| S |  |  |  | . | . | . | . | . |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  | . | . | . | . | . |  |  |  |  |  |  |
|
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|  |  |
Template SS confidence |   |
|
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  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
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|
. | . | . | . | . | . | . | . | . | 220 | . | . |
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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|
Query Sequence |   |
D | M | G | R | N | I | F | Q | S | D | H | P | V | A | M | M | K | A | V | Q | A |
Query Conservation |   |
|
|
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|
|   |
|
|   |
|
|   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
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|
Template Conservation |   |
|
|
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|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
L | A | A | S | V | F | H | F | G | E | I | P | I | P | K | L | K | R | Y | L | A |
Template Known Secondary structure |   |
 |  | S |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
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|
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|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
  |