Job Description P76143 Confidence 96.68% Date Thu Jan 5 12:19:36 GMT 2012 Rank 198 Aligned Residues 149 % Identity 11% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																.																																		.	.	.	.	.
Query SS confidence																.																																		.	.	.	.	.
Query Sequence		D	D	A	V	R	L	N	S	C	A	V	A	A	Q	.	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	.	.	.	.	.	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I
Query Conservation																.																																		.	.	.	.	.
Alig confidence																.					.	.	.	.	.	.	.																							.	.	.	.	.														.	.
Template Conservation																					.	.	.	.	.	.	.																																									.	.
Template Sequence		A	V	A	K	E	L	G	V	P	I	I	M	H	D	Y	L	T	G	G	.	.	.	.	.	.	.	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	.	.	L	A	K	A	L	R	M	S	G	G	D	H
Template Known Secondary structure					T	T	T	T		S											.	.	.	.	.	.	.															T								T	T						S		S	S	S	S						.	.											S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																																									.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.
		202	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.																						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G
Query Conservation									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.														.	.
Template Conservation																																																									.														.	.
Template Sequence		L	H	S	G	T	V	V	G	K	L	E	G	E	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	M	P	G	V	M	P	V	A	S	G	G	.	I	H	V	W	H	M	P	A	L	V	E	I	F	.	.	G	D	D	A	C	L	Q	F	G
Template Known Secondary structure							S	S	S	S	S																	S					B	G	G	G	T	B		S															S	S	.			G	G	G									.	.		S	S	S					S
Template Predicted Secondary structure																																																									.														.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.
		254	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.																.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	F	Q	S	D	H	.	P	V	A	M	M	K	A	V	Q	A	V	V	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	T	A	D	R	A	Y	E	L	Y	L	S
Query Conservation										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	T	L	G	H	P	W	G	N	A	P	G	A	A	A	N	R	V	A	L	E	A	C	T	Q	A	R	N	E	G	R	D	L	A	R	E	G	G	D	V	I	R	S	A	C	K	W	S	P	E
Template Known Secondary structure						T	S	T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions