|   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
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|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
| . |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
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|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
|
Query Sequence |   |
P | T | T | G | L | E | R | I | D | I | N | I | A | P | L | F | E | . |
H | . |
A | D | V | L | M | C | T | R | G | I | L | R | S | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
. |
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. |
. |
. |
. |
. |
. |
P | P | A | T | N | R | P | V | V | L | R | A | S | G | A | N | S | I |
Query Conservation |   |
|   |   |
|
|
|   |   |   |   |   |
|   |   |
|   |   | . |
| . |   |
|
|
|   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
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|
|
|
|
|
| . |
| . |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
Template Conservation |   |
|
|   |
|   |
|   |   |   |
|
|
|   |
|
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
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|
|   |   |   |
Template Sequence |   |
N | C | V | G | T | D | S | I | N | A | V | L | E | T | A | A | K | V | K | A | P | V | I | V | Q | F | S | N | G | G | A | S | F | I | A | G | K | G | V | K | S | D | V | P | Q | G | A | A | I | L | G | A | I | S | G | A | H | H | V | H | Q | M | A | E | H | Y | G | V | P | V | I | L | H | T | D | H | C | A | K | K |
Template Known Secondary structure |   |
 |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
| T | T | S |
|
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
|
|
|
| G | G |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|
Template SS confidence |   |
|
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  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
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|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
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|
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|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
L | A | E | L | S | N | E | A | V | A | L | S | . |
. |
. |
M | D | D | A | V | R | L | N | S | C | A | V | A | A | Q | V | Y | I | G | S | E | Y | E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | G | K | D | M | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |
| . | . | . |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
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|
|
|
| . | . | . |
|
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|
| . | . |
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|
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|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
| . | . |   |
|
|
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|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
|
|
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|
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | L | P | W | I | D | G | L | L | D | A | G | E | K | H | F | A | A | T | G | K | P | L | F | S | S | H | M | I | D | L | S | . |
. |
E | E | S | L | Q | E | N | I | E | I | C | S | K | Y | L | E | R | M | S | K | I | G | M | T | L | E | I | E | L | G | C | T | G | G | E | E | D | G | V | D | N | S | H | M | D | A |
Template Known Secondary structure |   |
G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S |
| S |  |  |  |  |
|
| T | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| S |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
  |   |
|
|
|
|
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | |
|
|
|
|
|
|
. | 210 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . |
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
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|
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|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
| . |
. |
. |
. |
. |
. |
. |
|
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|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
|
Query Sequence |   |
. |
. |
. |
. |
R | D | Q | R | Y | F | S | L | A | T | R | I | A | A | E | . |
M | G | A | Q | I | I | K | T | Y | . |
. |
. |
. |
. |
. |
. |
Y | V | E | . |
. |
. |
. |
. |
. |
. |
K | G | F | E | R | I | V | A | G | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | P | I | V | I | A | G | G | K | K | L | P | E | R |
Query Conservation |   |
. | . | . | . |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
| . |
|
|
|
|
|
|
|   |   | . | . | . | . | . | . | . |   |   |   | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|   |
|
|   |   |   |   |
|   |
Alig confidence |   |
. | . | . | . |
|
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|
|
| . |
|
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|
| . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . |
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|
| . | . | . | . | . | . | . | . | . |
|
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|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
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|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
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|
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|
|
|   |   |
|
Template Sequence |   |
S | A | L | Y | T | Q | P | E | D | V | D | Y | A | Y | T | E | L | S | K | I | S | P | R | F | T | I | A | A | S | F | G | N | V | H | G | V | Y | K | A | G | N | V | V | L | T | P | T | I | L | R | D | S | Q | E | Y | V | S | K | K | H | N | L | P | H | N | S | L | N | F | V | F | H | G | G | S | G | S | T | A | Q |
Template Known Secondary structure |   |
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |
|
| S | S |
|
|
| S | S |
|
|
| S |
|
|
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T |
| S |
|  |  |  |
| S |
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
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|
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
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|
|
|
Query Sequence |   |
E | A | L | E | M | C | W | Q | A | I | D | Q | G | A | S | G | V | D | M | G | R | N | I | F | Q | S | D | H | P | V | A | M | M | K | A | V | Q | A | V | V | H | H | N |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|
|   |   |
|
|
|
|   |
Alig confidence |   |
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . | . |
|   |
|
|
|   |   |
|
|   |
|
|
|
|   |
|
|
|   |   | . | . | . | . | . |
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Template Sequence |   |
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I | K | D | S | V | S | Y | G | V | V | K | M | N | I | D | T | D | T | Q | W | . |
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A | T | W | E | G | V | L | N | Y | Y | K | A | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
273 | |
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. | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
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. | . | . | . | . | . | 300 | . | . | . | . | . | . |
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