Job Description P76143 Confidence 95.92% Date Thu Jan 5 12:19:36 GMT 2012 Rank 218 Aligned Residues 134 % Identity 14% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	.	.	.	.	.	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I
Query Conservation																																																		.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																							.	.	.	.	.														.	.
Template Conservation																					.	.	.	.	.	.	.																																									.	.
Template Sequence		A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	.	.	.	.	.	.	.	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M	N	F	R	V	.	.	I	C	K	W	M	R	M	A	G	V	D	H
Template Known Secondary structure								T	T		S						G	G	G		.	.	.	.	.	.	.														T	T								T	T	T					S		T	T	S	S						.	.									T		S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																																									.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.
		202	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.																								.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure								.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	T	Y	Y	V	.	.	.	.	.	.	.	E	K	G	F	E	R	I	V	A	G	C	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D
Query Conservation								.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.											.
Template Conservation																																																															.	.	.											.
Template Sequence		I	H	A	G	T	V	V	G	K	L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	.	.	.	M	H	Q	L	I	H	Y	L	G	E	.	D	V	V	L	Q
Template Known Secondary structure							S	S	S	S	S																	S					B	T	T	T	T	B		S					T	T										S	S			T	T	S	.	.	.										S	.	S
Template Predicted Secondary structure																																																															.	.	.											.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.	.	.	.	.	.		.	.	.	400	.
		252	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	G	R	N	I	F	Q	S	D	H	.	P	V	A	M	M	K	A	V	Q	A	V	V
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		F	G	G	G	T	I	G	H	P	D	G	I	Q	A	G	A	T	A	N	R	V	A	L
Template Known Secondary structure			S					T		T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions