Job Description P76143 Confidence 89.21% Date Thu Jan 5 12:19:36 GMT 2012 Rank 320 Aligned Residues 147 % Identity 16% Template c3t07D_ PDB info PDB header:transferase/transferase inhibitor Chain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid Resolution 3.30 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		I	A	P	L	F	E	H	A	D	V	L	M	C	T	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	R	S	V	V	P	P	A	T	N	R	P	V	V	L	R	A	S	G	A	N	S	I	.	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	L	N	S	C
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																		.
Template Conservation																																								.	.
Template Sequence		I	E	E	I	L	E	V	S	D	G	L	M	V	A	R	G	D	M	G	V	E	I	P	P	E	K	V	P	M	V	Q	K	D	L	I	R	Q	C	.	.	N	K	L	G	K	P	V	I	T	A	T	Q	M	L	D	S	M	Q	R	N	P	R	A	T	R	A	E	A	S	D	V	A	N	A	I	Y	D	G	T	D
Template Known Secondary structure								T		S													S		G	G	G													.	.		T	T	T							S	S	S	S	G	G	G	G	T	S	S	S																T		S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		137	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure							.	.																											.	.																																		.
Query SS confidence							.	.																											.	.																																		.
Query Sequence		A	V	A	A	Q	.	.	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	.	.	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	.	I	I	K	T	Y	Y	V	E	K	G	F
Query Conservation							.	.																											.	.																																		.
Alig confidence							.	.				.																							.	.																																		.
Template Conservation												.
Template Sequence		A	V	M	L	S	G	E	T	A	A	.	G	L	Y	P	E	E	A	V	K	T	M	R	N	I	A	V	S	A	E	A	A	Q	D	Y	K	K	L	L	S	D	R	T	K	L	V	E	T	S	L	V	N	A	I	G	I	S	V	A	H	T	A	L	N	L	N	V	K	A	I	V	A	A	T	E	S	G	S	T	A
Template Known Secondary structure						S					T	.		S																			T														S				T	T	T														T		S							S	S	S
Template Predicted Secondary structure												.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		212	.	.	.	.	.	.	.		220	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		E	R	I	V	A	G	C	P	.	V	P	I	V	I
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		R	T	I	S	K	Y	R	P	H	S	D	I	I	A
Template Known Secondary structure						T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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