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Job DescriptionP76143
Confidence99.77%DateThu Jan 5 12:19:36 GMT 2012
Rank8Aligned Residues200
% Identity14%Templatec3ru6C_
PDB info PDB header:lyaseChain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100.........110.........120.........130.
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Query Sequence  VMLAFDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNRPVVLRASGANSILAELSNEAVALSMDDAV
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Template Sequence  LCVALDL. . . . . . . STKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEE. . . LKKVDDFKIFLDLKFHDIPNTMADAC
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   3...... 10.........20.........30.........40...... ...50.........60.........70..
 
   132 .......140.........150.........160.........170.........180... ......190......
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Query Sequence  R. . . . LNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRD. . . . . . . . . . . QRYFSLATRIAAE
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Template Sequence  EEVSKLGVDMINIHASAG. . . . . . . KIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYE
Template Known Secondary structure  TTT
SGGG
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   73......80.........90 .........100.........110.........120.........130.........140.....
 
   197..200........ .210.........220.........230.........240.........250.........260.........270....
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Query Sequence  MGAQIIKTYYVE. KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVH
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Template Sequence  NGLDGMVCSVFESKKIKEHTSSNFLTLTPGIRPFGAN. . . . . . LAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIH
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   146...150.........160.........170.........180.. .......190.........200.........210........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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