Job Description P76143 Confidence 99.25% Date Thu Jan 5 12:19:36 GMT 2012 Rank 39 Aligned Residues 230 % Identity 11% Template c3r89A_ PDB info PDB header:lyase Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5-phosphate decarboxylase from2 anaerococcus prevotii dsm 20548 Resolution 1.84 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		R	L	S	R	I	F	N	P	K	T	G	K	T	V	M	L	A	F	D	H	G	Y	F	Q	G	P	T	T	G	L	E	R	I	.	.	.	.	.	.	.	.	.	.	D	I	N	I	A	P	L	F	E	H	A	D	V	L	M	C	T	R	G	I	L	R	S	V	V	P	P	A	T	N	R	.	.	P	V	V	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.																																.	.
Alig confidence												.	.																						.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation												.	.
Template Sequence		K	L	Y	E	K	V	S	K	N	G	.	.	F	V	C	I	G	L	D	S	S	I	D	Y	I	P	E	N	X	K	A	G	K	S	V	S	E	A	L	F	S	Y	N	K	E	I	I	D	Q	T	Y	D	V	C	A	I	Y	K	L	Q	I	A	Y	Y	E	S	Y	G	I	E	G	X	I	A	Y	R	D	T	L	S
Template Known Secondary structure												.	.	S									G	G	G	S						T	T																			T	T	S		S											T	T
Template Predicted Secondary structure												.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		107	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																									.	.	.	.	.	.
Query SS confidence				.																									.	.	.	.	.	.
Query Sequence		R	A	.	S	G	A	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	.	.	.	.	.	.	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D
Query Conservation				.																									.	.	.	.	.	.
Alig confidence				.																									.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		Y	L	R	E	K	D	L	L	S	I	G	D	V	K	R	S	D	I	A	A	S	A	K	X	Y	A	K	A	H	F	E	G	D	F	E	T	D	F	I	T	L	N	P	Y	X	G	X	D	S	I	E	P	Y	E	E	.	.	.	.	.	Y	I	E	K	G	D	K	G	V	F	V	L	L	R	T	S	N	P	G	A
Template Known Secondary structure						T	T																									S	G	G	G			S							T	T		G	G	G	T	G	G	G			.	.	.	.	.				T	T	S											S	G	G	G
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		180	.	.	.																	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		M	V	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	.	E	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		K	D	F	E	V	L	P	V	D	G	E	E	F	F	Y	K	V	G	D	K	X	R	E	L	N	E	K	Y	I	G	K	S	G	F	G	P	I	G	L	V	V	G	A	T	H	S	E	E	V	E	K	I	R	K	R	Y	D	K	X	F	F	L	I	P	G	F	G	A	Q	K	A	D	S	X	N	V	Y	K	L	L
Template Known Secondary structure		G	T	T	T	T				T	T			T													G	G	G			T	T	S																							T	T	T										S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	.	.	.	.	.	D	H	P	V	A	M	M	K	A	V	Q	A	V	V	H	H
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		E	G	L	N	G	G	V	V	N	S	S	R	A	I	L	K	N	W	Q	N	Y	E	D	G	S	E	K	V	G	Y	Y	A	R	K	K	A	I	E
Template Known Secondary structure		B	T	T	B	S											T	G	G	G	G	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions