Return to main results Retrieve Phyre Job Id

Job DescriptionP76143
Confidence93.85%DateThu Jan 5 12:19:36 GMT 2012
Rank265Aligned Residues89
% Identity18%Templatec3lerA_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200........ .210.........220.........230.........240.......
Predicted Secondary structure 






...............













Query SS confidence 

























. . . . . . . . . . . . . . .






































Query Sequence  DQRYFSLATRIAAEMGAQIIKTYYVE. . . . . . . . . . . . . . . KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGA
Query Conservation 
   

  



 







     ...............
    

     



 

    
   
     

 


Alig confidence 

























...............



















.

















Template Conservation 
       
  
   

 

   




   

 


  
         
    

 

  . 
    
  
  
   

Template Sequence  DEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS. NATHEAVGLAKFAKEHGA
Template Known Secondary structure 
TTT

TTSTTTTGGGS
TTSS



.SSTT
Template Predicted Secondary structure 




















.




Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80... ......90.........100.
 
   248.250.........260.........270..
Predicted Secondary structure 






Query SS confidence 
























Query Sequence  SGVDMGRNIFQSDHPVAMMKAVQAV
Query Conservation   







 

 

     

  
Alig confidence 
























Template Conservation 
 
 
 

 
       
      
Template Sequence  DGILSVAPYYNKPTQQGLYEHYKAI
Template Known Secondary structure  S


SS


Template Predicted Secondary structure 









Template SS confidence 
























   102.......110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions